myRT

myRT report for GCA_002972305.1_ASM297230v1

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Seq: JZNX01000019.1 Escherichia coli strain HT2012100 scaffold19, whole genome shotgun sequence (24723 bp)
Overview 1 RT 1: 6750-10813 bp Neighborhood of RT #1 [6750, 10813] RVT-GII GIIM RVT-GII LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 Feature: gene Location: 6750-6917 bp Feature: gene Location: 7023-7211 bp Feature: gene Location: 7394-7921 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7400-7544 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7400-7544 bp Feature: domain Description: GIIM Note: maturase Location: 7622-7844 bp Feature: domain Description: GIIM Note: maturase Location: 7622-7844 bp Feature: gene Location: 7922-8626 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8123-8621 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 81 23-8621 bp Feature: gene Location: 9088-10527 bp Feature: domain Description: LZ_Tnp_IS66 Location: 9226-9451 bp Feature: domain Description: LZ_Tnp_IS66 Location: 9226-9451 bp Feature: domain Description: zf-IS66 Location: 9472-9604 bp Feature: domain Description: zf-IS66 Location: 9472-9604 bp Feature: domain Description: DDE_Tnp_IS66 Location: 9649-10486 bp Feature: domain Description: DDE_Tnp_IS66 Location: 9649-1 0486 bp Feature: gene Location: 10568-10813 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050)

Seq: JZNX01000082.1 Escherichia coli strain HT2012100 scaffold82, whole genome shotgun sequence (110271 bp)
Overview 1 RT 1: 30671-38764 bp Neighborhood of RT #1 [30671, 38764] Arm-DNA-bind_3 RVT-AbiP2 HTH_29 HTH_33 DDE_3 Feature: gene Location: 30671-31420 bp Feature: domain Description: Arm-DNA-bind_3 Location: 30701-30956 bp Feature: domain Description: Arm-DNA-bind_3 Location: 30701-30956 bp Feature: gene Location: 31683-35540 bp Feature: gene Location: 35763-37301 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 36192-36648 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 36192 -36648 bp Feature: gene Location: 37403-38440 bp Feature: domain Description: HTH_29 Location: 37499-37670 bp Feature: domain Description: HTH_2 9 Location: 37499-37670 bp Feature: domain Description: HTH_33 Location: 37703-37865 bp Feature: domain Description: HTH_33 Location: 37703-37865 bp Feature: domain Description: DDE_3 Location: 37907-38336 bp Feature: domain Description: DDE_3 Location: 37907-38336 bp Feature: gene Location: 38474-38764 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Arm-DNA-bind_3 (pfam13356), RVT-AbiP2, HTH_29 (pfam13551), HTH_33 (pfam13592), DDE_3 (pfam13358)