myRT

myRT report for GCA_002972445.1_ASM297244v1

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Seq: JZON01000004.1 Escherichia coli strain HT2012042 NODE_10_length_18153_cov_30.394039, whole genome shotgun sequence (18237 bp)
Overview 1 RT 1: 13850-17987 bp Neighborhood of RT #1 [13850, 17987] TnpB_IS66 LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 RVT-GII RVT-GII GIIM DDE_Tnp_IS66_C Feature: gene Location: 13850-14197 bp Feature: domain Description: TnpB_IS66 Location: 13877-14168 bp Feature: domain Description: TnpB_IS66 Location: 1 3877-1 41 68 bp Feature: gene Location: 14217-15656 bp Feature: domain Description: LZ_Tnp_IS66 Location: 14355-14580 bp Feature: domain Description: LZ_Tnp_IS66 Location: 1 4355-1 4580 bp Feature: domain Description: zf-IS66 Location: 14601-14733 bp Feature: domain Description: zf-IS66 Location: 1 4601 -1 4733 bp Feature: domain Description: DDE_Tnp_IS66 Location: 14778-15615 bp Feature: domain Description: DDE_Tnp_IS66 Location: 1 4778-1 561 5 bp Feature: gene Location: 16118-16822 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16319-16817 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 631 9-1 681 7 bp Feature: gene Location: 16823-17350 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16829-16973 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 6829-1 6973 bp Feature: domain Description: GIIM Note: maturase Location: 17051-17273 bp Feature: domain Description: GIIM Note: maturase Location: 1 7051 -1 7273 bp Feature: gene Location: 17466-17612 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 17478-17589 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 1 7478-1 7589 bp Feature: gene Location: 17820-17987 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TnpB_IS66 (pfam05717), LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050), RVT-GII, GIIM (pfam08388), DDE_Tnp_IS66_C (pfam13817)