myRT

myRT report for GCA_002972695.1_ASM297269v1

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Seq: JZQO01000028.1 Escherichia coli strain HT2012117 scaffold28, whole genome shotgun sequence (33616 bp)
Overview 1 RT 1: 23334-27071 bp Neighborhood of RT #1 [23334, 27088] SmpB RVT-UG11 PRK09678 D Feature: gene Location: 23334-23816 bp Feature: domain Description: SmpB Location: 23364-23811 bp Feature: domain Description: SmpB Location: 23364-2381 1 bp Feature: gene Location: 23950-24117 bp Feature: gene Location: 24502-25275 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 24637-25090 bp Feature: RT Description: RVT-UG1 1 Note: UG1 1 RT Location: 24637-25090 bp Feature: gene Location: 25679-25897 bp Feature: domain Description: PRK09678 Location: 25682-25880 bp Feature: domain Description: PRK09678 Location: 25682-25880 bp Feature: gene Location: 25988-27088 bp Feature: domain Description: D Location: 25994-27071 bp Feature: domain Description: D Location: 25994-27071 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SmpB (pfam01668), RVT-UG11, PRK09678 (DNA-binding transcriptional regulator; Provisional), D (PHA02561)

Seq: JZQO01000072.1 Escherichia coli strain HT2012117 scaffold72, whole genome shotgun sequence (1892 bp)
Overview 1 RT 1: 3-1701 bp Neighborhood of RT #1 [3, 1778] RVT-GII GIIM Feature: gene Location: 3-269 bp Feature: gene Location: 292-453 bp Feature: gene Location: 546-1778 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 747-1401 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 747-1401 bp Feature: domain Description: GIIM Note: maturase Location: 1479-1701 bp Feature: domain Description: GIIM Note: maturase Location: 1479-1701 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)