myRT

myRT report for GCA_002972735.1_ASM297273v1

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Seq: JZQF01000115.1 Escherichia coli strain HT2012135 scaffold115, whole genome shotgun sequence (16382 bp)
Overview 1 RT 1: 13565-16364 bp Neighborhood of RT #1 [13565, 16381] TnpB_IS66 LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 RVT-GII Feature: gene Location: 13565-13912 bp Feature: domain Description: TnpB_IS66 Location: 13592-13883 bp Feature: domain Description: TnpB_IS66 Location: 1 3592-1 3883 bp Feature: gene Location: 13932-15371 bp Feature: domain Description: LZ_Tnp_IS66 Location: 14070-14295 bp Feature: domain Description: LZ_Tnp_IS66 Location: 1 4070-1 4295 bp Feature: domain Description: zf-IS66 Location: 14316-14448 bp Feature: domain Description: zf-IS66 Location: 1 431 6-1 4448 bp Feature: domain Description: DDE_Tnp_IS66 Location: 14493-15330 bp Feature: domain Description: DDE_Tnp_IS66 Location: 1 4493-1 5330 bp Feature: gene Location: 15833-16381 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16034-16364 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 6034-1 6364 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TnpB_IS66 (pfam05717), LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050), RVT-GII

Seq: JZQF01000017.1 Escherichia coli strain HT2012135 scaffold17, whole genome shotgun sequence (1017 bp)
Overview 1 RT 1: 133-776 bp Neighborhood of RT #1 [133, 853] RVT-GII GIIM Feature: gene Location: 133-300 bp Feature: gene Location: 326-853 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 332-476 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 332 -476 bp Feature: domain Description: GIIM Note: maturase Location: 554-776 bp Feature: domain Description: GIIM Note: maturase Location: 554-776 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)