myRT

myRT report for GCA_002973295.1_ASM297329v1

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Seq: JZPW01000024.1 Escherichia coli strain HT2012153 Scaffold_cov_29.41_scaffold24, whole genome shotgun sequence (18970 bp)
Overview 1 RT 1: 7892-12029 bp Neighborhood of RT #1 [7892, 12029] TnpB_IS66 LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 RVT-GII RVT-GII GIIM DDE_Tnp_IS66_C Feature: gene Location: 7892-8239 bp Feature: domain Description: TnpB_IS66 Location: 7919-8210 bp Feature: domain Description: TnpB_IS66 Location: 791 9-821 0 bp Feature: gene Location: 8259-9698 bp Feature: domain Description: LZ_Tnp_IS66 Location: 8397-8622 bp Feature: domain Description: LZ_Tnp_IS66 Location: 8397-8622 bp Feature: domain Description: zf-IS66 Location: 8643-8775 bp Feature: domain Description: zf-IS66 Location: 8643-8775 bp Feature: domain Description: DDE_Tnp_IS66 Location: 8820-9657 bp Feature: domain Description: DDE_Tnp_IS66 Location: 8820-9657 bp Feature: gene Location: 10160-10864 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10361-10859 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 0361 -1 0859 bp Feature: gene Location: 10865-11392 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10871-11015 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 0871 -1 1 01 5 bp Feature: domain Description: GIIM Note: maturase Location: 11093-11315 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 093-1 1 31 5 bp Feature: gene Location: 11508-11654 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 11520-11631 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 1 1 520-1 1 631 bp Feature: gene Location: 11862-12029 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), DDE_Tnp_IS66_C (pfam13817), TnpB_IS66 (pfam05717), LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050)