myRT

myRT report for GCA_002973795.1_ASM297379v1

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Seq: PJEV01000001.1 Enterococcus faecium strain 13-165 Enterococcus_faecium_strain_13165_scaffold_1, whole genome shotgun sequence (810483 bp)
Overview 1 RT 1: 139173-143313 bp 2 RT 2: 599405-604157 bp Neighborhood of RT #1 [139173, 143342] Rve Tra8 RVT-AbiP2 HsdM Rve Neighborhood of RT #2 [599405, 604246] ArdA RVT-GII HNHc HTH_XRE Rol_Rep_N Rep_trans Feature: gene Location: 139173-139361 bp Feature: domain Description: Rve Location: 139179-139332 bp Feature: domain Description: Rve Location: 1 391 79-1 39332 bp Feature: gene Location: 139528-139668 bp Feature: domain Description: Tra8 Location: 139534-139648 bp Feature: domain Description: Tra8 Location: 1 39534-1 39648 bp Feature: gene Location: 139732-141120 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 139993-140458 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 1 39993-1 40458 bp Feature: gene Location: 141458-142936 bp Feature: domain Description: HsdM Location: 141479-142904 bp Feature: domain Description: HsdM Location: 1 41 479-1 42904 bp Feature: gene Location: 142959-143342 bp Feature: domain Description: Rve Location: 142965-143313 bp Feature: domain Description: Rve Location: 1 42965-1 4331 3 bp Feature: gene Location: 599405-599902 bp Feature: domain Description: ArdA Location: 599423-599888 bp Feature: domain Description: ArdA Location: 599423-599888 bp Feature: gene Location: 600019-600186 bp Feature: gene Location: 600347-602257 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 600680-601418 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 600680-601 41 8 bp Feature: domain Description: HNHc Note: nucleases Location: 601973-602138 bp Feature: domain Description: HNHc Note: nucleases Location: 601 973-6021 38 bp Feature: gene Location: 602766-602915 bp Feature: gene Location: 603041-604246 bp Feature: domain Description: HTH_XRE Location: 603086-603230 bp Feature: domain Description: HTH_XRE Location: 603086-603230 bp Feature: domain Description: Rol_Rep_N Location: 603257-603524 bp Feature: domain Description: Rol_Rep_N Location: 603257-603524 bp Feature: domain Description: Rep_trans Location: 603548-604157 bp Feature: domain Description: Rep_trans Location: 603548-6041 57 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Rve (COG3316), Tra8 (COG2826), RVT-AbiP2, HsdM (COG0286), ArdA (pfam07275), RVT-GII, HNHc (smart00507), HTH_XRE (smart00530), Rol_Rep_N (pfam18106), Rep_trans (pfam02486)

Seq: PJEV01000002.1 Enterococcus faecium strain 13-165 Enterococcus_faecium_strain_13165_scaffold_2, whole genome shotgun sequence (2032266 bp)
Overview 1 RT 1: 76988-80913 bp Neighborhood of RT #1 [76988, 80913] RVT-GII HNHc Feature: gene Location: 76988-77308 bp Feature: gene Location: 77496-77795 bp Feature: gene Location: 77983-79860 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 78298-79036 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 782 98-79036 bp Feature: domain Description: HNHc Note: nucleases Location: 79594-79747 bp Feature: domain Description: HNHc Note: nucleases Location: 79594-79747 bp Feature: gene Location: 80047-80280 bp Feature: gene Location: 80548-80913 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)