myRT

myRT report for GCA_002976395.1_ASM297639v1

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Seq: PCNX01000005.1 Bacillus cereus strain MYb220 MYb220_contig000005, whole genome shotgun sequence (563988 bp)
Overview 1 RT 1: 464983-474050 bp Neighborhood of RT #1 [464983, 474058] Methyltransf_11 PRK12268 RVT-UG3 RVT-UG8 EamA EamA BaeS Feature: gene Location: 464983-465903 bp Feature: domain Description: Methyltransf_11 Location: 465283-465550 bp Feature: domain Description: Methyltransf_1 1 Location: 465283-465550 bp Feature: gene Location: 466237-467871 bp Feature: domain Description: PRK12268 Location: 466243-467860 bp Feature: domain Description: PRK1 2268 Location: 466243-467860 bp Feature: gene Location: 468007-469179 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 468226-468682 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 468226-468682 bp Feature: gene Location: 469474-471468 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 469981-470431 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 469981 -470431 bp Feature: gene Location: 471574-472476 bp Feature: domain Description: EamA Location: 471595-471979 bp Feature: domain Description: EamA Location: 471 595-471 979 bp Feature: domain Description: EamA Location: 472024-472417 bp Feature: domain Description: EamA Location: 472024-47241 7 bp Feature: gene Location: 472616-474058 bp Feature: domain Description: BaeS Location: 473090-474050 bp Feature: domain Description: BaeS Location: 473090-474050 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Methyltransf_11 (pfam08241), PRK12268 (methionyl-tRNA synthetase; Reviewed), RVT-UG3, RVT-UG8, EamA (pfam00892), BaeS (COG0642)

Seq: PCNX01000013.1 Bacillus cereus strain MYb220 MYb220_contig000013, whole genome shotgun sequence (118186 bp)
Overview 1 RT 1: 22487-25895 bp Neighborhood of RT #1 [22487, 25933] group_II_RT_mat RVT-GII HNHc RadC KduI Feature: gene Location: 22487-22666 bp Feature: gene Location: 22885-23160 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 23011-23155 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 2 3011-2 3155 bp Feature: gene Location: 23173-24768 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23182-23923 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 3182 -2 392 3 bp Feature: domain Description: HNHc Note: nucleases Location: 24487-24655 bp Feature: domain Description: HNHc Note: nucleases Location: 2 4487-2 4655 bp Feature: gene Location: 24849-25061 bp Feature: domain Description: RadC Location: 24918-25053 bp Feature: domain Description: RadC Location: 2 4918-2 5053 bp Feature: gene Location: 25334-25933 bp Feature: domain Description: KduI Location: 25340-25895 bp Feature: domain Description: KduI Location: 2 5340-2 5895 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT group_II_RT_mat (TIGR04416), RVT-GII, HNHc (smart00507), RadC (pfam04002), KduI (pfam04962)

Seq: PCNX01000014.1 Bacillus cereus strain MYb220 MYb220_contig000014, whole genome shotgun sequence (96376 bp)
Overview 1 RT 1: 6720-10482 bp Neighborhood of RT #1 [6720, 10482] E1_enzyme_family RVT-GII HNHc Feature: gene Location: 6720-7121 bp Feature: domain Description: E1_enzyme_family Location: 6768-7104 bp Feature: domain Description: E1_enzyme_family Location: 6768-7104 bp Feature: gene Location: 7415-7549 bp Feature: gene Location: 7821-9701 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8151-8880 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8151-8880 bp Feature: domain Description: HNHc Note: nucleases Location: 9438-9588 bp Feature: domain Description: HNHc Note: nucleases Location: 943 8-9588 bp Feature: gene Location: 9765-10292 bp Feature: gene Location: 10354-10482 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT E1_enzyme_family (cl22428), RVT-GII, HNHc (smart00507)

Seq: PCNX01000019.1 Bacillus cereus strain MYb220 MYb220_contig000019, whole genome shotgun sequence (46569 bp)
Overview 1 RT 1: 3489-16742 bp Neighborhood of RT #1 [3489, 16742] holA LPD1 RVT-GII group_II_RT_mat HNHc RpoD DUF3854 RVT-GII GIIM HNHc Feature: gene Location: 3489-4484 bp Feature: domain Description: holA Location: 3495-4440 bp Feature: domain Description: holA Location: 34 95-4 4 4 0 bp Feature: gene Location: 4510-5178 bp Feature: domain Description: LPD1 Location: 4855-5056 bp Feature: domain Description: LPD1 Location: 4 855-5056 bp Feature: gene Location: 5382-7361 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5724-6420 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5724 -64 20 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 6531-6759 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 6531-6759 bp Feature: domain Description: HNHc Note: nucleases Location: 7080-7212 bp Feature: domain Description: HNHc Note: nucleases Location: 7080-7212 bp Feature: gene Location: 8057-9136 bp Feature: gene Location: 9317-10294 bp Feature: domain Description: RpoD Location: 9413-10235 bp Feature: domain Description: RpoD Location: 94 13-10235 bp Feature: gene Location: 10311-10541 bp Feature: gene Location: 11033-12304 bp Feature: domain Description: DUF3854 Location: 11951-12272 bp Feature: domain Description: DUF3854 Location: 11951-12272 bp Feature: gene Location: 12309-14096 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12567-13266 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12567-13266 bp Feature: domain Description: GIIM Note: maturase Location: 13350-13593 bp Feature: domain Description: GIIM Note: maturase Location: 13350-13593 bp Feature: domain Description: HNHc Note: nucleases Location: 13839-13977 bp Feature: domain Description: HNHc Note: nucleases Location: 13839-13977 bp Feature: gene Location: 14873-15016 bp Feature: gene Location: 15192-16742 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT holA (TIGR01128), LPD1 (pfam18796), RVT-GII, group_II_RT_mat (TIGR04416), HNHc (smart00507), RpoD (COG0568), DUF3854 (pfam12965), GIIM (pfam08388)

Seq: PCNX01000035.1 Bacillus cereus strain MYb220 MYb220_contig000035, whole genome shotgun sequence (2498 bp)
Overview 1 RT 1: 282-2455 bp Neighborhood of RT #1 [282, 2496] RVT-GII HNHc Feature: gene Location: 282-455 bp Feature: gene Location: 739-2496 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1039-1744 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1039-1744 bp Feature: domain Description: HNHc Note: nucleases Location: 2323-2455 bp Feature: domain Description: HNHc Note: nucleases Location: 2323-245 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)