myRT

myRT report for GCA_002976415.1_ASM297641v1

Download annotations/find similar RTs

Seq: PCNY01000013.1 Bacillus cereus strain MYb212 MYb212_13, whole genome shotgun sequence (118110 bp)
Overview 1 RT 1: 22389-25797 bp Neighborhood of RT #1 [22389, 25835] group_II_RT_mat RVT-GII HNHc RadC KduI Feature: gene Location: 22389-22568 bp Feature: gene Location: 22787-23062 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 22913-23057 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 2291 3-23057 bp Feature: gene Location: 23075-24670 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23084-23825 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23084-23825 bp Feature: domain Description: HNHc Note: nucleases Location: 24389-24557 bp Feature: domain Description: HNHc Note: nucleases Location: 24389-24557 bp Feature: gene Location: 24751-24963 bp Feature: domain Description: RadC Location: 24820-24955 bp Feature: domain Description: RadC Location: 24820-24955 bp Feature: gene Location: 25236-25835 bp Feature: domain Description: KduI Location: 25242-25797 bp Feature: domain Description: KduI Location: 25242-25797 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT group_II_RT_mat (TIGR04416), RVT-GII, HNHc (smart00507), RadC (pfam04002), KduI (pfam04962)

Seq: PCNY01000034.1 Bacillus cereus strain MYb212 MYb212_34, whole genome shotgun sequence (2498 bp)
Overview 1 RT 1: 282-2455 bp Neighborhood of RT #1 [282, 2496] RVT-GII HNHc Feature: gene Location: 282-455 bp Feature: gene Location: 739-2496 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1039-1744 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1039-1744 bp Feature: domain Description: HNHc Note: nucleases Location: 2323-2455 bp Feature: domain Description: HNHc Note: nucleases Location: 2 32 3-2 455 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)

Seq: PCNY01000005.1 Bacillus cereus strain MYb212 MYb212_5, whole genome shotgun sequence (564958 bp)
Overview 1 RT 1: 90739-99461 bp Neighborhood of RT #1 [90739, 99814] BaeS EamA EamA RVT-UG8 RVT-UG3 PRK12268 Methyltransf_11 Feature: gene Location: 90739-92181 bp Feature: domain Description: BaeS Location: 91213-92173 bp Feature: domain Description: BaeS Location: 91213 -92173 bp Feature: gene Location: 92321-93223 bp Feature: domain Description: EamA Location: 92342-92726 bp Feature: domain Description: EamA Location: 923 42-92726 bp Feature: domain Description: EamA Location: 92771-93164 bp Feature: domain Description: EamA Location: 92771-93 164 bp Feature: gene Location: 93329-95323 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 93836-94286 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 93 83 6-94286 bp Feature: gene Location: 95618-96790 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 95837-96293 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 9583 7-96293 bp Feature: gene Location: 96926-98560 bp Feature: domain Description: PRK12268 Location: 96932-98549 bp Feature: domain Description: PRK12268 Location: 9693 2-98549 bp Feature: gene Location: 98894-99814 bp Feature: domain Description: Methyltransf_11 Location: 99194-99461 bp Feature: domain Description: Methyltransf_11 Location: 99194-99461 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT BaeS (COG0642), EamA (pfam00892), RVT-UG8, RVT-UG3, PRK12268 (methionyl-tRNA synthetase; Reviewed), Methyltransf_11 (pfam08241)

Seq: PCNY01000009.1 Bacillus cereus strain MYb212 MYb212_9, whole genome shotgun sequence (149858 bp)
Overview 1 RT 1: 91463-95208 bp 2 RT 2: 106656-119909 bp Neighborhood of RT #1 [91463, 95225] RVT-GII HNHc E1_enzyme_family Neighborhood of RT #2 [106656, 119909] holA LPD1 RVT-GII group_II_RT_mat HNHc RpoD DUF3854 RVT-GII GIIM HNHc Feature: gene Location: 91463-91591 bp Feature: gene Location: 91653-92180 bp Feature: gene Location: 92244-94124 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 92574-93303 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 92574 -93303 bp Feature: domain Description: HNHc Note: nucleases Location: 93861-94011 bp Feature: domain Description: HNHc Note: nucleases Location: 93861-94 011 bp Feature: gene Location: 94396-94530 bp Feature: gene Location: 94824-95225 bp Feature: domain Description: E1_enzyme_family Location: 94872-95208 bp Feature: domain Description: E1_enzyme_family Location: 94 872-95208 bp Feature: gene Location: 106656-107651 bp Feature: domain Description: holA Location: 106662-107607 bp Feature: domain Description: holA Location: 106662-107607 bp Feature: gene Location: 107677-108345 bp Feature: domain Description: LPD1 Location: 108022-108223 bp Feature: domain Description: LPD1 Location: 108022-108223 bp Feature: gene Location: 108549-110528 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 108891-109587 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 108891-109587 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 109698-109926 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 109698-109926 bp Feature: domain Description: HNHc Note: nucleases Location: 110247-110379 bp Feature: domain Description: HNHc Note: nucleases Location: 11024 7-110379 bp Feature: gene Location: 111224-112303 bp Feature: gene Location: 112484-113461 bp Feature: domain Description: RpoD Location: 112580-113402 bp Feature: domain Description: RpoD Location: 112580-1134 02 bp Feature: gene Location: 113478-113708 bp Feature: gene Location: 114200-115471 bp Feature: domain Description: DUF3854 Location: 115118-115439 bp Feature: domain Description: DUF3854 Location: 115118-1154 39 bp Feature: gene Location: 115476-117263 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 115734-116433 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 115734 -1164 33 bp Feature: domain Description: GIIM Note: maturase Location: 116517-116760 bp Feature: domain Description: GIIM Note: maturase Location: 116517-116760 bp Feature: domain Description: HNHc Note: nucleases Location: 117006-117144 bp Feature: domain Description: HNHc Note: nucleases Location: 117006-11714 4 bp Feature: gene Location: 118040-118183 bp Feature: gene Location: 118359-119909 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507), E1_enzyme_family (cl22428), holA (TIGR01128), LPD1 (pfam18796), group_II_RT_mat (TIGR04416), RpoD (COG0568), DUF3854 (pfam12965), GIIM (pfam08388)