myRT

myRT report for GCA_002977595.1_ASM297759v1

Download annotations/find similar RTs

Seq: NRLL01000125.1 Cronobacter sakazakii strain 494G contig125, whole genome shotgun sequence (367 bp)
Overview 1 RT 1: 3-367 bp Neighborhood of RT #1 [3, 366] RVT-Retrons RVT-Retrons Feature: gene Location: 3-206 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 6-195 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 6-1 95 bp Feature: gene Location: 217-366 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 223-367 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 223-367 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons

Seq: NRLL01000026.1 Cronobacter sakazakii strain 494G contig26, whole genome shotgun sequence (48432 bp)
Overview 1 RT 1: 8173-13797 bp Neighborhood of RT #1 [8173, 13797] Psu RVT-UG8 INT_P4_C Feature: gene Location: 8173-8310 bp Feature: gene Location: 8262-8498 bp Feature: domain Description: Psu Location: 8334-8484 bp Feature: domain Description: Psu Location: 8334-8484 bp Feature: gene Location: 9063-11072 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 9576-10020 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 9576-1002 0 bp Feature: gene Location: 12617-12901 bp Feature: domain Description: INT_P4_C Location: 12689-12896 bp Feature: domain Description: INT_P4_C Location: 12 689-12 896 bp Feature: gene Location: 13261-13797 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Psu (pfam07455), RVT-UG8, INT_P4_C (cd00801)

Seq: NRLL01000090.1 Cronobacter sakazakii strain 494G contig90, whole genome shotgun sequence (438 bp)
Overview 1 RT 1: 1-436 bp Neighborhood of RT #1 [1, 435] RVT-GII RVT-GII Feature: gene Location: 1-435 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 37-280 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 7-280 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 376-436 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 76-43 6 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII