myRT

myRT report for GCA_002981225.1_ASM298122v1

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Seq: PVGK01000053.1 Burkholderia contaminans strain AU20979 AU20979_NODE_19.ctg_1, whole genome shotgun sequence (153211 bp)
Overview 1 RT 1: 44263-49996 bp Neighborhood of RT #1 [44263, 49996] DEXHc_Snf RVT_N RVT-GII GIIM HNHc SF2_C_SNF Feature: gene Location: 44263-44568 bp Feature: gene Location: 44704-45759 bp Feature: domain Description: DEXHc_Snf Location: 44923-45184 bp Feature: domain Description: DEXHc_Snf Location: 44923-451 84 bp Feature: gene Location: 46356-48074 bp Feature: RT Description: RVT_N Location: 46413-46650 bp Feature: RT Description: RVT_N Location: 4641 3-46650 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 46701-47352 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 46701 -47352 bp Feature: domain Description: GIIM Note: maturase Location: 47406-47637 bp Feature: domain Description: GIIM Note: maturase Location: 47406-47637 bp Feature: domain Description: HNHc Note: nucleases Location: 47871-48027 bp Feature: domain Description: HNHc Note: nucleases Location: 47871 -48027 bp Feature: gene Location: 48241-49401 bp Feature: domain Description: SF2_C_SNF Location: 48859-49237 bp Feature: domain Description: SF2_C_SNF Location: 48859-49237 bp Feature: gene Location: 49460-49996 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DEXHc_Snf (cd17919), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), SF2_C_SNF (cd18793)

Seq: PVGK01000119.1 Burkholderia contaminans strain AU20979 AU20979_NODE_44.ctg_1, whole genome shotgun sequence (46240 bp)
Overview 1 RT 1: 290-3797 bp Neighborhood of RT #1 [290, 3862] RVT-GII GIIM Ga5DH-like_SDR_c MFS_ExuT_GudP_like Feature: gene Location: 290-1537 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 293-869 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 93-869 bp Feature: domain Description: GIIM Note: maturase Location: 920-1154 bp Feature: domain Description: GIIM Note: maturase Location: 92 0-1154 bp Feature: gene Location: 1818-2546 bp Feature: domain Description: Ga5DH-like_SDR_c Location: 1845-2541 bp Feature: domain Description: Ga5DH-like_SDR_c Location: 1845-2 541 bp Feature: gene Location: 2552-3862 bp Feature: domain Description: MFS_ExuT_GudP_like Location: 2594-3797 bp Feature: domain Description: MFS_ExuT_GudP_like Location: 2 594-3797 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Ga5DH-like_SDR_c (cd05347), MFS_ExuT_GudP_like (cd17319), RVT-GII, GIIM (pfam08388)

Seq: PVGK01000102.1 Burkholderia contaminans strain AU20979 AU20979_NODE_9.ctg_1, whole genome shotgun sequence (239529 bp)
Overview 1 RT 1: 65639-70922 bp Neighborhood of RT #1 [65639, 70945] FIN RVT-Retrons Histone_HNS MFS_MucK Feature: gene Location: 65639-65911 bp Feature: gene Location: 66571-67143 bp Feature: domain Description: FIN Location: 66748-67105 bp Feature: domain Description: FIN Location: 66748-67105 bp Feature: gene Location: 67298-68758 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 67874-68510 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 67874-68510 bp Feature: gene Location: 69050-69400 bp Feature: domain Description: Histone_HNS Location: 69092-69329 bp Feature: domain Description: Histone_HNS Location: 69092-693 29 bp Feature: gene Location: 69698-70945 bp Feature: domain Description: MFS_MucK Location: 69788-70922 bp Feature: domain Description: MFS_MucK Location: 69788-70922 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FIN (cd16389), RVT-Retrons, Histone_HNS (pfam00816), MFS_MucK (cd17371)