myRT

myRT report for GCA_002982795.1_ASM298279v1

Download annotations/find similar RTs

Seq: PHVR01000019.1 Staphylococcus aureus strain Case5_N0b scaffold_18, whole genome shotgun sequence (27567 bp)
Overview 1 RT 1: 3611-11218 bp Neighborhood of RT #1 [3611, 11244] RVT-AbiK RVT-AbiK PenP MecR1 Transpeptidase Feature: gene Location: 3611-3775 bp Feature: gene Location: 5265-5873 bp Feature: gene Location: 6413-7003 bp Feature: RT Description: RVT-AbiK Note: AbiK RT Location: 6887-6986 bp Feature: RT Description: RVT-AbiK Note: AbiK RT Location: 6887-6986 bp Feature: gene Location: 7090-8181 bp Feature: RT Description: RVT-AbiK Note: AbiK RT Location: 7093-7273 bp Feature: RT Description: RVT-AbiK Note: AbiK RT Location: 7093-7273 bp Feature: gene Location: 8535-9380 bp Feature: domain Description: PenP Location: 8541-9372 bp Feature: domain Description: PenP Location: 8541 -9372 bp Feature: gene Location: 9445-11244 bp Feature: domain Description: MecR1 Location: 9487-10519 bp Feature: domain Description: MecR1 Location: 9487-1 051 9 bp Feature: domain Description: Transpeptidase Location: 10573-11218 bp Feature: domain Description: Transpeptidase Location: 1 0573-1 1 21 8 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-AbiK, PenP (COG2367), MecR1 (COG4219), Transpeptidase (pfam00905)

Seq: PHVR01000004.1 Staphylococcus aureus strain Case5_N0b scaffold_3, whole genome shotgun sequence (190313 bp)
Overview 1 RT 1: 140676-146119 bp Neighborhood of RT #1 [140676, 146127] RVT-Retrons PRK08617 Feature: gene Location: 140676-141323 bp Feature: gene Location: 141323-141952 bp Feature: gene Location: 142197-143213 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 142347-142884 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 142 347-142 884 bp Feature: gene Location: 143941-144165 bp Feature: gene Location: 144463-146127 bp Feature: domain Description: PRK08617 Location: 144472-146119 bp Feature: domain Description: PRK08617 Location: 144472 -146119 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, PRK08617 (acetolactate synthase AlsS)