myRT

myRT report for GCA_002982975.1_ASM298297v1

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Seq: PHVZ01000028.1 Staphylococcus aureus strain Case4_N208 scaffold_27, whole genome shotgun sequence (36829 bp)
Overview 1 RT 1: 3563-5355 bp Neighborhood of RT #1 [3563, 6263] UppP Rve RVT-AbiK Feature: gene Location: 3563-3766 bp Feature: domain Description: UppP Location: 3569-3752 bp Feature: domain Description: UppP Location: 3569-3752 bp Feature: gene Location: 3796-4470 bp Feature: domain Description: Rve Location: 3802-4447 bp Feature: domain Description: Rve Location: 3802-4447 bp Feature: gene Location: 4491-6263 bp Feature: RT Description: RVT-AbiK Note: AbiK RT Location: 4965-5355 bp Feature: RT Description: RVT-AbiK Note: AbiK RT Location: 4965-5355 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT UppP (COG1968), Rve (COG3316), RVT-AbiK

Seq: PHVZ01000004.1 Staphylococcus aureus strain Case4_N208 scaffold_3, whole genome shotgun sequence (112629 bp)
Overview 1 RT 1: 44130-49581 bp Neighborhood of RT #1 [44130, 49581] PRK08617 RVT-Retrons Feature: gene Location: 44130-45794 bp Feature: domain Description: PRK08617 Location: 44139-45786 bp Feature: domain Description: PRK08617 Location: 44139-45786 bp Feature: gene Location: 46092-46316 bp Feature: gene Location: 47044-48060 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 47194-47731 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 47194-47731 bp Feature: gene Location: 48305-48934 bp Feature: gene Location: 48934-49581 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK08617 (acetolactate synthase AlsS), RVT-Retrons

Seq: PHVZ01000040.1 Staphylococcus aureus strain Case4_N208 scaffold_39, whole genome shotgun sequence (27562 bp)
Overview 1 RT 1: 6583-14191 bp Neighborhood of RT #1 [6583, 14217] RVT-AbiK RVT-AbiK PenP MecR1 Transpeptidase Feature: gene Location: 6583-6747 bp Feature: gene Location: 8237-8845 bp Feature: gene Location: 9386-9976 bp Feature: RT Description: RVT-AbiK Note: AbiK RT Location: 9860-9959 bp Feature: RT Description: RVT-AbiK Note: AbiK RT Location: 9860-9959 bp Feature: gene Location: 10063-11154 bp Feature: RT Description: RVT-AbiK Note: AbiK RT Location: 10066-10246 bp Feature: RT Description: RVT-AbiK Note: AbiK RT Location: 10066-10246 bp Feature: gene Location: 11508-12353 bp Feature: domain Description: PenP Location: 11514-12345 bp Feature: domain Description: PenP Location: 11514-123 45 bp Feature: gene Location: 12418-14217 bp Feature: domain Description: MecR1 Location: 12460-13492 bp Feature: domain Description: MecR1 Location: 12460-13 492 bp Feature: domain Description: Transpeptidase Location: 13546-14191 bp Feature: domain Description: Transpeptidase Location: 13 546-14191 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-AbiK, PenP (COG2367), MecR1 (COG4219), Transpeptidase (pfam00905)