myRT

myRT report for GCA_002991515.1_ASM299151v1

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Seq: PKCC01000157.1 Pseudomonas oleovorans isolate BFMG3 NODE_263_length_8920_cov_12.5701, whole genome shotgun sequence (8920 bp)
Overview 1 RT 1: 202-3222 bp Neighborhood of RT #1 [202, 3251] RVT_N RVT-GII GIIM HNH PRK10791 lipid_A_lpxH Feature: gene Location: 202-1917 bp Feature: RT Description: RVT_N Location: 256-499 bp Feature: RT Description: RVT_N Location: 256-499 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 544-1180 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 544-1 1 80 bp Feature: domain Description: GIIM Note: maturase Location: 1243-1477 bp Feature: domain Description: GIIM Note: maturase Location: 1 243-1 477 bp Feature: domain Description: HNH Note: nucleases Location: 1729-1867 bp Feature: domain Description: HNH Note: nucleases Location: 1 729-1 867 bp Feature: gene Location: 2038-2532 bp Feature: domain Description: PRK10791 Location: 2041-2530 bp Feature: domain Description: PRK1 0791 Location: 2041 -2530 bp Feature: gene Location: 2679-3251 bp Feature: domain Description: lipid_A_lpxH Location: 2685-3222 bp Feature: domain Description: lipid_A_lpxH Location: 2685-3222 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844), PRK10791 (peptidylprolyl isomerase B), lipid_A_lpxH (TIGR01854)

Seq: PKCC01000647.1 Pseudomonas oleovorans isolate BFMG3 NODE_3846_length_1909_cov_93.5415, whole genome shotgun sequence (1909 bp)
Overview 1 RT 1: 405-1638 bp Neighborhood of RT #1 [405, 1772] RVT-GII GIIM Feature: gene Location: 405-1772 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 738-1353 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 738-1353 bp Feature: domain Description: GIIM Note: maturase Location: 1410-1638 bp Feature: domain Description: GIIM Note: maturase Location: 1410-1638 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: PKCC01000961.1 Pseudomonas oleovorans isolate BFMG3 NODE_9283_length_933_cov_30.9988, whole genome shotgun sequence (933 bp)
Overview 1 RT 1: 1-928 bp Neighborhood of RT #1 [1, 930] RVT-GII mutS1 Feature: gene Location: 1-930 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 142-757 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 142-757 bp Feature: domain Description: mutS1 Location: 823-928 bp Feature: domain Description: mutS1 Location: 823 -928 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, mutS1 (TIGR01070)