myRT

myRT report for GCA_002991825.1_ASM299182v1

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Seq: PQIU01000017.1 Escherichia coli strain SC186 Scaffold16_1, whole genome shotgun sequence (103227 bp)
Overview 1 RT 1: 7682-11100 bp 2 RT 2: 35423-39706 bp Neighborhood of RT #1 [7682, 11165] InsE PHA02517 RVT-GII GIIM PHA02517 Neighborhood of RT #2 [35423, 39714] RVT-GII RVT-GII GIIM YesM Feature: gene Location: 7682-8032 bp Feature: domain Description: InsE Location: 7691-7976 bp Feature: domain Description: InsE Location: 7691 -7976 bp Feature: gene Location: 8137-8583 bp Feature: domain Description: PHA02517 Location: 8140-8581 bp Feature: domain Description: PHA0251 7 Location: 81 40-8581 bp Feature: gene Location: 8700-10223 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8973-9705 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8973-9705 bp Feature: domain Description: GIIM Note: maturase Location: 9780-9978 bp Feature: domain Description: GIIM Note: maturase Location: 9780-9978 bp Feature: gene Location: 10177-10602 bp Feature: gene Location: 10815-11165 bp Feature: domain Description: PHA02517 Location: 10821-11100 bp Feature: domain Description: PHA0251 7 Location: 1 0821 -1 1 1 00 bp Feature: gene Location: 35423-36328 bp Feature: gene Location: 36466-36657 bp Feature: gene Location: 36814-37353 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 37144-37222 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 371 44-37222 bp Feature: gene Location: 37381-37902 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 37387-37669 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 37387-37669 bp Feature: domain Description: GIIM Note: maturase Location: 37717-37897 bp Feature: domain Description: GIIM Note: maturase Location: 3771 7-37897 bp Feature: gene Location: 38224-38412 bp Feature: gene Location: 38452-39714 bp Feature: domain Description: YesM Location: 38965-39706 bp Feature: domain Description: YesM Location: 38965-39706 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), YesM (COG2972)

Seq: PQIU01000034.1 Escherichia coli strain SC186 Scaffold33_1, whole genome shotgun sequence (51890 bp)
Overview 1 RT 1: 9251-14920 bp Neighborhood of RT #1 [9251, 14946] SR_ResInv DUF262 DUF1524 RVT-Retrons PBP2_CrgA_like_5 Feature: gene Location: 9251-9478 bp Feature: domain Description: SR_ResInv Location: 9296-9413 bp Feature: domain Description: SR_ResInv Location: 92 96-9413 bp Feature: gene Location: 9512-11401 bp Feature: domain Description: DUF262 Location: 9536-10280 bp Feature: domain Description: DUF2 62 Location: 9536-102 80 bp Feature: domain Description: DUF1524 Location: 10865-11369 bp Feature: domain Description: DUF152 4 Location: 10865-11369 bp Feature: gene Location: 12199-14034 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 12334-13030 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 12 334-13030 bp Feature: gene Location: 14146-14274 bp Feature: gene Location: 14536-14946 bp Feature: domain Description: PBP2_CrgA_like_5 Location: 14608-14920 bp Feature: domain Description: PBP2 _CrgA_like_5 Location: 14608-1492 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SR_ResInv (cd03768), DUF262 (pfam03235), DUF1524 (pfam07510), RVT-Retrons, PBP2_CrgA_like_5 (cd08474)