myRT

myRT report for GCA_002991865.1_ASM299186v1

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Seq: PQIY01000018.1 Escherichia coli strain SC145 Scaffold18_1, whole genome shotgun sequence (103261 bp)
Overview 1 RT 1: 63536-67827 bp 2 RT 2: 91194-95512 bp Neighborhood of RT #1 [63536, 67827] YesM RVT-GII GIIM RVT-GII Neighborhood of RT #2 [91194, 95568] PHA02517 RVT-GII GIIM PHA02517 InsE Feature: gene Location: 63536-64798 bp Feature: domain Description: YesM Location: 64049-64790 bp Feature: domain Description: YesM Location: 64049-64790 bp Feature: gene Location: 64828-64998 bp Feature: gene Location: 65348-65869 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 65354-65636 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 65354-65636 bp Feature: domain Description: GIIM Note: maturase Location: 65684-65864 bp Feature: domain Description: GIIM Note: maturase Location: 65684-65864 bp Feature: gene Location: 65897-66436 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 66227-66305 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 66227-66305 bp Feature: gene Location: 66467-66664 bp Feature: gene Location: 66922-67827 bp Feature: gene Location: 91194-92018 bp Feature: gene Location: 92145-92435 bp Feature: domain Description: PHA02517 Location: 92151-92370 bp Feature: domain Description: PHA0251 7 Location: 921 51 -92370 bp Feature: gene Location: 93027-94550 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 93300-94032 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 93300-94032 bp Feature: domain Description: GIIM Note: maturase Location: 94107-94305 bp Feature: domain Description: GIIM Note: maturase Location: 941 07-94305 bp Feature: gene Location: 94727-95113 bp Feature: domain Description: PHA02517 Location: 94730-95111 bp Feature: domain Description: PHA0251 7 Location: 94730-951 1 1 bp Feature: gene Location: 95218-95568 bp Feature: domain Description: InsE Location: 95227-95512 bp Feature: domain Description: InsE Location: 95227-9551 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YesM (COG2972), RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), InsE (COG2963)

Seq: PQIY01000031.1 Escherichia coli strain SC145 Scaffold31_1, whole genome shotgun sequence (51914 bp)
Overview 1 RT 1: 9263-14932 bp Neighborhood of RT #1 [9263, 14958] SR_ResInv DUF262 DUF1524 RVT-Retrons PBP2_CrgA_like_5 Feature: gene Location: 9263-9490 bp Feature: domain Description: SR_ResInv Location: 9308-9425 bp Feature: domain Description: SR_ResInv Location: 9308-942 5 bp Feature: gene Location: 9524-11413 bp Feature: domain Description: DUF262 Location: 9548-10292 bp Feature: domain Description: DUF2 62 Location: 9548-102 92 bp Feature: domain Description: DUF1524 Location: 10877-11381 bp Feature: domain Description: DUF152 4 Location: 10877-11381 bp Feature: gene Location: 12211-14046 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 12346-13042 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 12 346-13042 bp Feature: gene Location: 14158-14286 bp Feature: gene Location: 14548-14958 bp Feature: domain Description: PBP2_CrgA_like_5 Location: 14620-14932 bp Feature: domain Description: PBP2 _CrgA_like_5 Location: 1462 0-14932 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SR_ResInv (cd03768), DUF262 (pfam03235), DUF1524 (pfam07510), RVT-Retrons, PBP2_CrgA_like_5 (cd08474)