myRT

myRT report for GCA_002991885.1_ASM299188v1

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Seq: PQIZ01000019.1 Escherichia coli strain SC144 Scaffold19_1, whole genome shotgun sequence (103255 bp)
Overview 1 RT 1: 63518-67809 bp 2 RT 2: 91176-95494 bp Neighborhood of RT #1 [63518, 67809] YesM RVT-GII GIIM RVT-GII Neighborhood of RT #2 [91176, 95550] PHA02517 RVT-GII GIIM PHA02517 InsE Feature: gene Location: 63518-64780 bp Feature: domain Description: YesM Location: 64031-64772 bp Feature: domain Description: YesM Location: 64031 -64772 bp Feature: gene Location: 64810-64980 bp Feature: gene Location: 65330-65851 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 65336-65618 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 65336-6561 8 bp Feature: domain Description: GIIM Note: maturase Location: 65666-65846 bp Feature: domain Description: GIIM Note: maturase Location: 65666-65846 bp Feature: gene Location: 65879-66418 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 66209-66287 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 66209-66287 bp Feature: gene Location: 66449-66646 bp Feature: gene Location: 66904-67809 bp Feature: gene Location: 91176-92000 bp Feature: gene Location: 92127-92417 bp Feature: domain Description: PHA02517 Location: 92133-92352 bp Feature: domain Description: PHA0251 7 Location: 921 33-92352 bp Feature: gene Location: 93009-94532 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 93282-94014 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 93282-9401 4 bp Feature: domain Description: GIIM Note: maturase Location: 94089-94287 bp Feature: domain Description: GIIM Note: maturase Location: 94089-94287 bp Feature: gene Location: 94709-95095 bp Feature: domain Description: PHA02517 Location: 94712-95093 bp Feature: domain Description: PHA0251 7 Location: 9471 2-95093 bp Feature: gene Location: 95200-95550 bp Feature: domain Description: InsE Location: 95209-95494 bp Feature: domain Description: InsE Location: 95209-95494 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YesM (COG2972), RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), InsE (COG2963)

Seq: PQIZ01000032.1 Escherichia coli strain SC144 Scaffold32_1, whole genome shotgun sequence (51938 bp)
Overview 1 RT 1: 9275-14944 bp Neighborhood of RT #1 [9275, 14970] SR_ResInv DUF262 DUF1524 RVT-Retrons PBP2_CrgA_like_5 Feature: gene Location: 9275-9502 bp Feature: domain Description: SR_ResInv Location: 9320-9437 bp Feature: domain Description: SR_ResInv Location: 932 0-9437 bp Feature: gene Location: 9536-11425 bp Feature: domain Description: DUF262 Location: 9560-10304 bp Feature: domain Description: DUF2 62 Location: 9560-10304 bp Feature: domain Description: DUF1524 Location: 10889-11393 bp Feature: domain Description: DUF152 4 Location: 10889-11393 bp Feature: gene Location: 12223-14058 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 12358-13054 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 12 358-13054 bp Feature: gene Location: 14170-14298 bp Feature: gene Location: 14560-14970 bp Feature: domain Description: PBP2_CrgA_like_5 Location: 14632-14944 bp Feature: domain Description: PBP2 _CrgA_like_5 Location: 14632 -14944 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SR_ResInv (cd03768), DUF262 (pfam03235), DUF1524 (pfam07510), RVT-Retrons, PBP2_CrgA_like_5 (cd08474)