myRT

myRT report for GCA_002992065.1_ASM299206v1

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Seq: PQIT01000016.1 Escherichia coli strain SC193 Scaffold16_1, whole genome shotgun sequence (103266 bp)
Overview 1 RT 1: 7706-11124 bp 2 RT 2: 35447-39730 bp Neighborhood of RT #1 [7706, 11189] InsE PHA02517 RVT-GII GIIM PHA02517 Neighborhood of RT #2 [35447, 39738] RVT-GII RVT-GII GIIM YesM Feature: gene Location: 7706-8056 bp Feature: domain Description: InsE Location: 7715-8000 bp Feature: domain Description: InsE Location: 771 5-8000 bp Feature: gene Location: 8161-8607 bp Feature: domain Description: PHA02517 Location: 8164-8605 bp Feature: domain Description: PHA0251 7 Location: 81 64-8605 bp Feature: gene Location: 8724-10247 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8997-9729 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8997-9729 bp Feature: domain Description: GIIM Note: maturase Location: 9804-10002 bp Feature: domain Description: GIIM Note: maturase Location: 9804-1 0002 bp Feature: gene Location: 10201-10626 bp Feature: gene Location: 10839-11189 bp Feature: domain Description: PHA02517 Location: 10845-11124 bp Feature: domain Description: PHA0251 7 Location: 1 0845-1 1 1 24 bp Feature: gene Location: 35447-36352 bp Feature: gene Location: 36490-36681 bp Feature: gene Location: 36838-37377 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 37168-37246 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 371 68-37246 bp Feature: gene Location: 37405-37926 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 37411-37693 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3741 1 -37693 bp Feature: domain Description: GIIM Note: maturase Location: 37741-37921 bp Feature: domain Description: GIIM Note: maturase Location: 37741 -37921 bp Feature: gene Location: 38248-38436 bp Feature: gene Location: 38476-39738 bp Feature: domain Description: YesM Location: 38989-39730 bp Feature: domain Description: YesM Location: 38989-39730 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), YesM (COG2972)

Seq: PQIT01000033.1 Escherichia coli strain SC193 Scaffold32_1, whole genome shotgun sequence (51938 bp)
Overview 1 RT 1: 9275-14944 bp Neighborhood of RT #1 [9275, 14970] SR_ResInv DUF262 DUF1524 RVT-Retrons PBP2_CrgA_like_5 Feature: gene Location: 9275-9502 bp Feature: domain Description: SR_ResInv Location: 9320-9437 bp Feature: domain Description: SR_ResInv Location: 932 0-9437 bp Feature: gene Location: 9536-11425 bp Feature: domain Description: DUF262 Location: 9560-10304 bp Feature: domain Description: DUF2 62 Location: 9560-10304 bp Feature: domain Description: DUF1524 Location: 10889-11393 bp Feature: domain Description: DUF152 4 Location: 10889-11393 bp Feature: gene Location: 12223-14058 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 12358-13054 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 12 358-13054 bp Feature: gene Location: 14170-14298 bp Feature: gene Location: 14560-14970 bp Feature: domain Description: PBP2_CrgA_like_5 Location: 14632-14944 bp Feature: domain Description: PBP2 _CrgA_like_5 Location: 14632 -14944 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SR_ResInv (cd03768), DUF262 (pfam03235), DUF1524 (pfam07510), RVT-Retrons, PBP2_CrgA_like_5 (cd08474)