myRT

myRT report for GCA_002994615.1_ASM299461v1

Download annotations/find similar RTs

Seq: PVNK01000022.1 Enhygromyxa salina strain SWB005 ENSA5_contig000022, whole genome shotgun sequence (32694 bp)
Overview 1 RT 1: 4024-16082 bp Neighborhood of RT #1 [4024, 16315] WD40 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 RVT-Retrons DUF4956 Feature: gene Location: 4024-10713 bp Feature: domain Description: WD40 Location: 4051-4924 bp Feature: domain Description: WD40 Location: 4051 -4924 bp Feature: domain Description: HEAT_2 Location: 5083-5317 bp Feature: domain Description: HEAT_2 Location: 5083-531 7 bp Feature: domain Description: HEAT_2 Location: 5452-5707 bp Feature: domain Description: HEAT_2 Location: 5452-5707 bp Feature: domain Description: HEAT_2 Location: 5842-6109 bp Feature: domain Description: HEAT_2 Location: 5842-61 09 bp Feature: domain Description: HEAT_2 Location: 6280-6526 bp Feature: domain Description: HEAT_2 Location: 6280-6526 bp Feature: domain Description: HEAT_2 Location: 6592-6745 bp Feature: domain Description: HEAT_2 Location: 6592-6745 bp Feature: domain Description: HEAT_2 Location: 6778-7033 bp Feature: domain Description: HEAT_2 Location: 6778-7033 bp Feature: domain Description: HEAT_2 Location: 7063-7285 bp Feature: domain Description: HEAT_2 Location: 7063-7285 bp Feature: domain Description: HEAT_2 Location: 7948-8185 bp Feature: domain Description: HEAT_2 Location: 7948-81 85 bp Feature: domain Description: HEAT_2 Location: 8257-8476 bp Feature: domain Description: HEAT_2 Location: 8257-8476 bp Feature: domain Description: HEAT_2 Location: 8683-8869 bp Feature: domain Description: HEAT_2 Location: 8683-8869 bp Feature: domain Description: HEAT_2 Location: 8923-9160 bp Feature: domain Description: HEAT_2 Location: 8923-91 60 bp Feature: domain Description: HEAT_2 Location: 9169-9334 bp Feature: domain Description: HEAT_2 Location: 91 69-9334 bp Feature: domain Description: HEAT_2 Location: 9565-9742 bp Feature: domain Description: HEAT_2 Location: 9565-9742 bp Feature: domain Description: HEAT_2 Location: 10201-10381 bp Feature: domain Description: HEAT_2 Location: 1 0201 -1 0381 bp Feature: domain Description: HEAT_2 Location: 10525-10660 bp Feature: domain Description: HEAT_2 Location: 1 0525-1 0660 bp Feature: gene Location: 10872-12605 bp Feature: gene Location: 13073-14419 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 13550-14171 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 3550-1 41 71 bp Feature: gene Location: 14999-15412 bp Feature: gene Location: 15611-16315 bp Feature: domain Description: DUF4956 Location: 15830-16082 bp Feature: domain Description: DUF4956 Location: 1 5830-1 6082 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT WD40 (smart00320), HEAT_2 (pfam13646), RVT-Retrons, DUF4956 (pfam16316)

Seq: PVNK01000119.1 Enhygromyxa salina strain SWB005 ENSA5_contig000119, whole genome shotgun sequence (79067 bp)
Overview 1 RT 1: 2-4450 bp Neighborhood of RT #1 [2, 4450] MYXO-CTERM DUF262 RVT-UG23 Feature: gene Location: 2-136 bp Feature: domain Description: MYXO-CTERM Location: 53-131 bp Feature: domain Description: MYXO-CTERM Location: 53-131 bp Feature: gene Location: 1452-3596 bp Feature: domain Description: DUF262 Location: 1503-2070 bp Feature: domain Description: DUF2 62 Location: 1503-2 070 bp Feature: RT Description: RVT-UG23 Note: UG23 RT Location: 2289-2883 bp Feature: RT Description: RVT-UG2 3 Note: UG2 3 RT Location: 2 2 89-2 883 bp Feature: gene Location: 3587-4549 bp Feature: gene Location: 3884-4450 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MYXO-CTERM (TIGR03901), DUF262 (pfam03235), RVT-UG23

Seq: PVNK01000201.1 Enhygromyxa salina strain SWB005 ENSA5_contig000201, whole genome shotgun sequence (43401 bp)
Overview 1 RT 1: 31462-39060 bp Neighborhood of RT #1 [31462, 39060] S2P-M50_SpoIVFB_CBS lysA RVT-GII GIIM PRK14294 Feature: gene Location: 31462-32442 bp Feature: domain Description: S2P-M50_SpoIVFB_CBS Location: 31531-32164 bp Feature: domain Description: S2P-M50_SpoIVFB_CBS Location: 3 153 1-3 2164 bp Feature: gene Location: 32497-33840 bp Feature: domain Description: lysA Location: 32602-33817 bp Feature: domain Description: lysA Location: 3 2602-3 3 817 bp Feature: gene Location: 35673-36902 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 35865-36477 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 5865-3 6477 bp Feature: domain Description: GIIM Note: maturase Location: 36540-36756 bp Feature: domain Description: GIIM Note: maturase Location: 3 6540-3 6756 bp Feature: gene Location: 37154-38176 bp Feature: domain Description: PRK14294 Location: 37157-38135 bp Feature: domain Description: PRK14294 Location: 3 7157-3 813 5 bp Feature: gene Location: 38404-39060 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT S2P-M50_SpoIVFB_CBS (cd06164), lysA (TIGR01048), RVT-GII, GIIM (pfam08388), PRK14294 (chaperone protein DnaJ; Provisional)

Seq: PVNK01000310.1 Enhygromyxa salina strain SWB005 ENSA5_contig000310, whole genome shotgun sequence (31461 bp)
Overview 1 RT 1: 348-8284 bp Neighborhood of RT #1 [348, 8517] FHA HEAT_2 RVT-Retrons HEAT_2 HEAT_2 HEAT_2 Aldo_ket_red TPR_20 Feature: gene Location: 348-2489 bp Feature: domain Description: FHA Location: 489-681 bp Feature: domain Description: FHA Location: 4 89-681 bp Feature: gene Location: 3482-4918 bp Feature: domain Description: HEAT_2 Location: 3638-3815 bp Feature: domain Description: HEAT_2 Location: 3638-3815 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4073-4688 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4 073-4 688 bp Feature: gene Location: 5137-8127 bp Feature: domain Description: HEAT_2 Location: 5218-5374 bp Feature: domain Description: HEAT_2 Location: 5218-5374 bp Feature: domain Description: HEAT_2 Location: 5431-5692 bp Feature: domain Description: HEAT_2 Location: 54 31-5692 bp Feature: domain Description: HEAT_2 Location: 6139-6403 bp Feature: domain Description: HEAT_2 Location: 6139-64 03 bp Feature: domain Description: Aldo_ket_red Location: 7378-7942 bp Feature: domain Description: Aldo_ket_red Location: 7378-794 2 bp Feature: gene Location: 8146-8517 bp Feature: domain Description: TPR_20 Location: 8158-8284 bp Feature: domain Description: TPR_20 Location: 8158-8284 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FHA (smart00240), HEAT_2 (pfam13646), RVT-Retrons, Aldo_ket_red (pfam00248), TPR_20 (pfam14561)