myRT

myRT report for GCA_002994635.1_ASM299463v1

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Seq: PVNL01000016.1 Enhygromyxa salina strain SWB007 ENSA7_contig000016, whole genome shotgun sequence (18077 bp)
Overview 1 RT 1: 12190-17419 bp Neighborhood of RT #1 [12190, 18075] DEXDc RVT-GII GIIM PHA02517 Helicase_C_2 Feature: gene Location: 12190-12546 bp Feature: gene Location: 12933-14156 bp Feature: domain Description: DEXDc Location: 12984-13800 bp Feature: domain Description: DEXDc Location: 1 2984-1 3800 bp Feature: gene Location: 14831-16090 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15035-15689 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 5035-1 5689 bp Feature: domain Description: GIIM Note: maturase Location: 15770-15992 bp Feature: domain Description: GIIM Note: maturase Location: 1 5770-1 5992 bp Feature: gene Location: 16242-17075 bp Feature: domain Description: PHA02517 Location: 16257-17058 bp Feature: domain Description: PHA0251 7 Location: 1 6257-1 7058 bp Feature: gene Location: 17206-18075 bp Feature: domain Description: Helicase_C_2 Location: 17209-17419 bp Feature: domain Description: Helicase_C_2 Location: 1 7209-1 741 9 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DEXDc (smart00487), RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), Helicase_C_2 (pfam13307)

Seq: PVNL01000057.1 Enhygromyxa salina strain SWB007 ENSA7_contig000057, whole genome shotgun sequence (293332 bp)
Overview 1 RT 1: 25013-31401 bp Neighborhood of RT #1 [25013, 31401] HEAT_2 HEAT_2 HEAT_2 HEAT_2 Aldo_ket_red RimL HEAT_2 RVT-Retrons Feature: gene Location: 25013-27970 bp Feature: domain Description: HEAT_2 Location: 25076-25337 bp Feature: domain Description: HEAT_2 Location: 2 5076-2 5337 bp Feature: domain Description: HEAT_2 Location: 25388-25571 bp Feature: domain Description: HEAT_2 Location: 2 5388-2 5571 bp Feature: domain Description: HEAT_2 Location: 25991-26264 bp Feature: domain Description: HEAT_2 Location: 2 5991-2 62 64 bp Feature: domain Description: HEAT_2 Location: 26513-26774 bp Feature: domain Description: HEAT_2 Location: 2 6513-2 6774 bp Feature: domain Description: Aldo_ket_red Location: 27227-27776 bp Feature: domain Description: Aldo_ket_red Location: 2 72 2 7-2 7776 bp Feature: gene Location: 27996-28592 bp Feature: domain Description: RimL Location: 28056-28581 bp Feature: domain Description: RimL Location: 2 8056-2 8581 bp Feature: gene Location: 28847-30292 bp Feature: domain Description: HEAT_2 Location: 28886-29153 bp Feature: domain Description: HEAT_2 Location: 2 8886-2 9153 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 29435-30056 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 9435-30056 bp Feature: gene Location: 30318-31166 bp Feature: gene Location: 31255-31401 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HEAT_2 (pfam13646), Aldo_ket_red (pfam00248), RimL (COG1670), RVT-Retrons

Seq: PVNL01000069.1 Enhygromyxa salina strain SWB007 ENSA7_contig000069, whole genome shotgun sequence (172528 bp)
Overview 1 RT 1: 74832-89702 bp Neighborhood of RT #1 [74832, 89707] WD40 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 RVT-Retrons COG4637 Cytochrome_CBB3 CccA CccA Feature: gene Location: 74832-81542 bp Feature: domain Description: WD40 Location: 74868-75747 bp Feature: domain Description: WD40 Location: 74868-75747 bp Feature: domain Description: HEAT_2 Location: 75999-76230 bp Feature: domain Description: HEAT_2 Location: 75999-7623 0 bp Feature: domain Description: HEAT_2 Location: 76275-76530 bp Feature: domain Description: HEAT_2 Location: 76275-7653 0 bp Feature: domain Description: HEAT_2 Location: 76665-76932 bp Feature: domain Description: HEAT_2 Location: 76665-7693 2 bp Feature: domain Description: HEAT_2 Location: 77103-77349 bp Feature: domain Description: HEAT_2 Location: 77103 -773 49 bp Feature: domain Description: HEAT_2 Location: 77412-77568 bp Feature: domain Description: HEAT_2 Location: 77412-77568 bp Feature: domain Description: HEAT_2 Location: 77595-77856 bp Feature: domain Description: HEAT_2 Location: 77595-77856 bp Feature: domain Description: HEAT_2 Location: 77889-78108 bp Feature: domain Description: HEAT_2 Location: 77889-78108 bp Feature: domain Description: HEAT_2 Location: 78759-78999 bp Feature: domain Description: HEAT_2 Location: 78759-78999 bp Feature: domain Description: HEAT_2 Location: 79074-79296 bp Feature: domain Description: HEAT_2 Location: 79074-79296 bp Feature: domain Description: HEAT_2 Location: 79503-79668 bp Feature: domain Description: HEAT_2 Location: 79503 -79668 bp Feature: domain Description: HEAT_2 Location: 79752-79995 bp Feature: domain Description: HEAT_2 Location: 79752-79995 bp Feature: domain Description: HEAT_2 Location: 80046-80325 bp Feature: domain Description: HEAT_2 Location: 80046-803 25 bp Feature: domain Description: HEAT_2 Location: 80391-80571 bp Feature: domain Description: HEAT_2 Location: 803 91-80571 bp Feature: domain Description: HEAT_2 Location: 81024-81210 bp Feature: domain Description: HEAT_2 Location: 81024-81210 bp Feature: domain Description: HEAT_2 Location: 81351-81489 bp Feature: domain Description: HEAT_2 Location: 813 51-81489 bp Feature: gene Location: 81539-83437 bp Feature: gene Location: 83440-84771 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 83917-84544 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 83 917-84544 bp Feature: gene Location: 86101-87249 bp Feature: domain Description: COG4637 Location: 86104-87133 bp Feature: domain Description: COG463 7 Location: 86104-8713 3 bp Feature: gene Location: 88196-89707 bp Feature: domain Description: Cytochrome_CBB3 Location: 88583-88640 bp Feature: domain Description: Cytochrome_CBB3 Location: 88583 -88640 bp Feature: domain Description: CccA Location: 89057-89261 bp Feature: domain Description: CccA Location: 89057-89261 bp Feature: domain Description: CccA Location: 89561-89702 bp Feature: domain Description: CccA Location: 89561-89702 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT WD40 (smart00320), HEAT_2 (pfam13646), RVT-Retrons, COG4637 (Predicted ATPase ), Cytochrome_CBB3 (pfam13442), CccA (COG2010)