myRT

myRT report for GCA_002994975.1_ASM299497v1

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Seq: PVQH01000019.1 Escherichia coli strain 802 contig_19, whole genome shotgun sequence (26843 bp)
Overview 1 RT 1: 2181-6181 bp Neighborhood of RT #1 [2181, 6189] DcuC RVT-GII Asparaginase_2 Feature: gene Location: 2181-3542 bp Feature: domain Description: DcuC Location: 2184-3516 bp Feature: domain Description: DcuC Location: 21 84-351 6 bp Feature: gene Location: 3595-3966 bp Feature: gene Location: 4188-4634 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4494-4596 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4494-4596 bp Feature: gene Location: 4682-4831 bp Feature: gene Location: 5158-6189 bp Feature: domain Description: Asparaginase_2 Location: 5248-6181 bp Feature: domain Description: Asparaginase_2 Location: 5248-61 81 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DcuC (TIGR00771), RVT-GII, Asparaginase_2 (pfam01112)

Seq: PVQH01000066.1 Escherichia coli strain 802 contig_66, whole genome shotgun sequence (28645 bp)
Overview 1 RT 1: 25107-28519 bp Neighborhood of RT #1 [25107, 28527] InsE PHA02517 RVT-GII GIIM Tra5 Feature: gene Location: 25107-25406 bp Feature: domain Description: InsE Location: 25137-25401 bp Feature: domain Description: InsE Location: 2 5137-2 5401 bp Feature: gene Location: 25403-25870 bp Feature: domain Description: PHA02517 Location: 25469-25808 bp Feature: domain Description: PHA02 517 Location: 2 5469-2 5808 bp Feature: gene Location: 26462-27703 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26735-27467 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 6735-2 7467 bp Feature: domain Description: GIIM Note: maturase Location: 27542-27698 bp Feature: domain Description: GIIM Note: maturase Location: 2 7542 -2 7698 bp Feature: gene Location: 27755-27985 bp Feature: gene Location: 28096-28527 bp Feature: domain Description: Tra5 Location: 28102-28519 bp Feature: domain Description: Tra5 Location: 2 8102 -2 8519 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), Tra5 (COG2801)