myRT

myRT report for GCA_002995655.1_ASM299565v1

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Seq: NWTN01000001.1 Vibrio mediterranei strain 17LN0615E Contig_144, whole genome shotgun sequence (801020 bp)
Overview 1 RT 1: 494335-506001 bp Neighborhood of RT #1 [494335, 506015] Resolvase Recombinase Zn_ribbon_recom RVT-UG8 RVT-UG3 Mob_Pre MiaE RVT-UNC MiaE Feature: gene Location: 494335-495864 bp Feature: domain Description: Resolvase Location: 494356-494830 bp Feature: domain Description: Resolvase Location: 494356-494830 bp Feature: domain Description: Recombinase Location: 494896-495082 bp Feature: domain Description: Recombinase Location: 494896-495082 bp Feature: domain Description: Zn_ribbon_recom Location: 495175-495322 bp Feature: domain Description: Zn_ribbon_recom Location: 4951 75-495322 bp Feature: gene Location: 495884-496051 bp Feature: gene Location: 496125-498149 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 496701-497145 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 496701 -4971 45 bp Feature: gene Location: 498150-499376 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 498432-498909 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 498432-498909 bp Feature: gene Location: 499532-500467 bp Feature: domain Description: Mob_Pre Location: 499571-500114 bp Feature: domain Description: Mob_Pre Location: 499571 -5001 1 4 bp Feature: gene Location: 500856-501119 bp Feature: gene Location: 501140-501691 bp Feature: gene Location: 501747-502511 bp Feature: domain Description: MiaE Location: 501762-502488 bp Feature: domain Description: MiaE Location: 501 762-502488 bp Feature: gene Location: 502551-504275 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 502965-503373 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 502965-503373 bp Feature: gene Location: 504281-505237 bp Feature: gene Location: 505362-506015 bp Feature: domain Description: MiaE Location: 505374-506001 bp Feature: domain Description: MiaE Location: 505374-506001 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Resolvase (smart00857), Recombinase (pfam07508), Zn_ribbon_recom (pfam13408), RVT-UG8, RVT-UG3, Mob_Pre (pfam01076), MiaE (pfam06175), RVT-UG25/RVT-DGRs/RVT-UG10/RVT-UG17(RVT-UNC)

Seq: NWTN01000011.1 Vibrio mediterranei strain 17LN0615E Contig_16, whole genome shotgun sequence (139713 bp)
Overview 1 RT 1: 2-4269 bp 2 RT 2: 12460-15592 bp Neighborhood of RT #1 [2, 4269] Zn_Tnp_IS91 Y2_Tnp RVT_N RVT-GII GIIM Neighborhood of RT #2 [12460, 15592] HicA_toxin HicB_lk_antitox RVT-GII Feature: gene Location: 2-1069 bp Feature: domain Description: Zn_Tnp_IS91 Location: 8-182 bp Feature: domain Description: Zn_Tnp_IS91 Location: 8-182 bp Feature: domain Description: Y2_Tnp Location: 296-830 bp Feature: domain Description: Y2 _Tnp Location: 2 96-830 bp Feature: gene Location: 1204-1668 bp Feature: gene Location: 1837-3468 bp Feature: domain Description: RVT_N Location: 2044-2287 bp Feature: domain Description: RVT_N Location: 2 044-2 2 87 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2332-2959 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 332 -2 959 bp Feature: domain Description: GIIM Note: maturase Location: 3019-3244 bp Feature: domain Description: GIIM Note: maturase Location: 3019-32 44 bp Feature: gene Location: 3504-3647 bp Feature: gene Location: 4012-4269 bp Feature: gene Location: 12460-12642 bp Feature: domain Description: HicA_toxin Location: 12472-12640 bp Feature: domain Description: HicA_toxin Location: 12 472 -12 640 bp Feature: gene Location: 12664-13086 bp Feature: domain Description: HicB_lk_antitox Location: 12688-13072 bp Feature: domain Description: HicB_lk_antitox Location: 12 688-13072 bp Feature: gene Location: 13437-14567 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13725-14412 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1372 5-14412 bp Feature: gene Location: 14791-15090 bp Feature: gene Location: 15449-15592 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Zn_Tnp_IS91 (pfam14319), Y2_Tnp (pfam04986), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HicA_toxin (pfam07927), HicB_lk_antitox (pfam15919)