myRT

myRT report for GCA_002997345.1_ASM299734v1

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Seq: CP025389.1 Enterococcus faecium strain 13-009 chromosome (2948815 bp)
Overview 1 RT 1: 2088521-2093801 bp 2 RT 2: 2405127-2411389 bp Neighborhood of RT #1 [2088521, 2094493] Glucosaminidase Peptidase_M23 RVT-GII HNHc VirB4 Neighborhood of RT #2 [2405127, 2411532] ArdA RVT-GII HNHc HTH_XRE Rol_Rep_N Rep_trans FtsK Feature: gene Location: 2088521-2089726 bp Feature: domain Description: Glucosaminidase Location: 2088797-2089193 bp Feature: domain Description: Glucosaminidase Location: 2088797-20891 93 bp Feature: domain Description: Peptidase_M23 Location: 2089370-2089607 bp Feature: domain Description: Peptidase_M23 Location: 2089370-2089607 bp Feature: gene Location: 2089726-2090046 bp Feature: gene Location: 2090234-2092111 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2090549-2091287 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2090549-2091 287 bp Feature: domain Description: HNHc Note: nucleases Location: 2091845-2091998 bp Feature: domain Description: HNHc Note: nucleases Location: 2091 845-2091 998 bp Feature: gene Location: 2092298-2092531 bp Feature: gene Location: 2092799-2094493 bp Feature: domain Description: VirB4 Location: 2093117-2093801 bp Feature: domain Description: VirB4 Location: 20931 1 7-2093801 bp Feature: gene Location: 2405127-2405624 bp Feature: domain Description: ArdA Location: 2405145-2405610 bp Feature: domain Description: ArdA Location: 24051 45-240561 0 bp Feature: gene Location: 2405741-2405908 bp Feature: gene Location: 2406069-2407979 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2406402-2407140 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2406402-24071 40 bp Feature: domain Description: HNHc Note: nucleases Location: 2407695-2407860 bp Feature: domain Description: HNHc Note: nucleases Location: 2407695-2407860 bp Feature: gene Location: 2408763-2409968 bp Feature: domain Description: HTH_XRE Location: 2408808-2408952 bp Feature: domain Description: HTH_XRE Location: 2408808-2408952 bp Feature: domain Description: Rol_Rep_N Location: 2408979-2409246 bp Feature: domain Description: Rol_Rep_N Location: 2408979-2409246 bp Feature: domain Description: Rep_trans Location: 2409270-2409879 bp Feature: domain Description: Rep_trans Location: 2409270-2409879 bp Feature: gene Location: 2410147-2411532 bp Feature: domain Description: FtsK Location: 2410756-2411389 bp Feature: domain Description: FtsK Location: 241 0756-241 1 389 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Glucosaminidase (pfam01832), Peptidase_M23 (pfam01551), RVT-GII, HNHc (smart00507), VirB4 (COG3451), ArdA (pfam07275), HTH_XRE (smart00530), Rol_Rep_N (pfam18106), Rep_trans (pfam02486), FtsK (COG1674)

Seq: CP025390.1 Enterococcus faecium strain 13-009 plasmid unnamed1 (56983 bp)
Overview 1 RT 1: 61-3666 bp Neighborhood of RT #1 [61, 3695] RVT-AbiP2 HsdM Rve Feature: gene Location: 61-1536 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 409-874 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 409-874 bp Feature: gene Location: 1874-3352 bp Feature: domain Description: HsdM Location: 1895-3320 bp Feature: domain Description: HsdM Location: 1895-332 0 bp Feature: gene Location: 3375-3695 bp Feature: domain Description: Rve Location: 3381-3666 bp Feature: domain Description: Rve Location: 3381-3666 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-AbiP2, HsdM (COG0286), Rve (COG3316)