myRT

myRT report for GCA_002998815.1_ASM299881v1

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Seq: PVRL01000018.1 Bacillus thuringiensis strain NMTD81 NODE_18_length_108712_cov_21.9234, whole genome shotgun sequence (108712 bp)
Overview 1 RT 1: 61420-65737 bp Neighborhood of RT #1 [61420, 65787] T_den_put_tspse PDDEXK_2 RVT-GII HNHc PDDEXK_2 DUF2199 Feature: gene Location: 61420-61848 bp Feature: domain Description: T_den_put_tspse Location: 61441-61834 bp Feature: domain Description: T_den_put_tspse Location: 61 441 -61 834 bp Feature: gene Location: 61855-62136 bp Feature: domain Description: PDDEXK_2 Location: 61858-62110 bp Feature: domain Description: PDDEXK_2 Location: 61 858-621 1 0 bp Feature: gene Location: 62335-64104 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 62596-63298 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 62596-63298 bp Feature: domain Description: HNHc Note: nucleases Location: 63853-63988 bp Feature: domain Description: HNHc Note: nucleases Location: 63853-63988 bp Feature: gene Location: 64841-65047 bp Feature: domain Description: PDDEXK_2 Location: 64871-65012 bp Feature: domain Description: PDDEXK_2 Location: 64871 -6501 2 bp Feature: gene Location: 65278-65787 bp Feature: domain Description: DUF2199 Location: 65320-65737 bp Feature: domain Description: DUF21 99 Location: 65320-65737 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT T_den_put_tspse (TIGR01784), PDDEXK_2 (pfam12784), RVT-GII, HNHc (smart00507), DUF2199 (pfam09965)

Seq: PVRL01000019.1 Bacillus thuringiensis strain NMTD81 NODE_19_length_103274_cov_18.2592, whole genome shotgun sequence (103274 bp)
Overview 1 RT 1: 64555-72614 bp Neighborhood of RT #1 [64555, 72673] CwlT_like RVT-GII Intron_maturas2 HNHc NlpD Spr Feature: gene Location: 64555-67944 bp Feature: gene Location: 67941-69245 bp Feature: domain Description: CwlT_like Location: 68793-69234 bp Feature: domain Description: CwlT_like Location: 68793-692 34 bp Feature: gene Location: 69821-71644 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 70085-70919 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 70085-70919 bp Feature: domain Description: Intron_maturas2 Location: 70988-71327 bp Feature: domain Description: Intron_maturas2 Location: 70988-7132 7 bp Feature: domain Description: HNHc Note: nucleases Location: 71465-71621 bp Feature: domain Description: HNHc Note: nucleases Location: 71465-7162 1 bp Feature: gene Location: 71646-71780 bp Feature: gene Location: 71795-72673 bp Feature: domain Description: NlpD Location: 71819-72242 bp Feature: domain Description: NlpD Location: 71819-72 2 42 bp Feature: domain Description: Spr Location: 72278-72614 bp Feature: domain Description: Spr Location: 72 2 78-72 614 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CwlT_like, RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), NlpD (COG0739), Spr (COG0791)

Seq: PVRL01000002.1 Bacillus thuringiensis strain NMTD81 NODE_2_length_693722_cov_18.2584, whole genome shotgun sequence (693722 bp)
Overview 1 RT 1: 587479-591204 bp Neighborhood of RT #1 [587479, 591204] Peptidases_S8_Subtilisin_subset RVT-GII RVT-GII Feature: gene Location: 587479-588264 bp Feature: gene Location: 588280-589251 bp Feature: domain Description: Peptidases_S8_Subtilisin_subset Location: 588499-589147 bp Feature: domain Description: Peptidases_S8_Subtilisin_subset Location: 588499-589147 bp Feature: gene Location: 589799-590284 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 589805-590105 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 589805-590105 bp Feature: gene Location: 590359-590625 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 590377-590596 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5903 77-590596 bp Feature: gene Location: 590761-590913 bp Feature: gene Location: 590935-591204 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Peptidases_S8_Subtilisin_subset (cd07477), RVT-GII

Seq: PVRL01000043.1 Bacillus thuringiensis strain NMTD81 NODE_43_length_2554_cov_35.1137, whole genome shotgun sequence (2554 bp)
Overview 1 RT 1: 105-1893 bp Neighborhood of RT #1 [105, 1922] RVT-GII Intron_maturas2 HNHc Feature: gene Location: 105-1922 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 375-1200 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 375-1200 bp Feature: domain Description: Intron_maturas2 Location: 1278-1572 bp Feature: domain Description: Intron_maturas2 Location: 1278-1572 bp Feature: domain Description: HNHc Note: nucleases Location: 1719-1893 bp Feature: domain Description: HNHc Note: nucleases Location: 1719-1893 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: PVRL01000007.1 Bacillus thuringiensis strain NMTD81 NODE_7_length_279520_cov_17.8551, whole genome shotgun sequence (279520 bp)
Overview 1 RT 1: 140101-149721 bp Neighborhood of RT #1 [140101, 149747] PHA02517 InsE AE_Prim_S_like RVT-UG10 INT_ICEBs1_C_like HipB Feature: gene Location: 140101-140841 bp Feature: domain Description: PHA02517 Location: 140116-140821 bp Feature: domain Description: PHA025 17 Location: 140116-140821 bp Feature: gene Location: 140976-141296 bp Feature: domain Description: InsE Location: 141000-141153 bp Feature: domain Description: InsE Location: 141000-14115 3 bp Feature: gene Location: 141917-147556 bp Feature: domain Description: AE_Prim_S_like Location: 142064-142346 bp Feature: domain Description: AE_Prim_S_like Location: 142064-142346 bp Feature: RT Description: RVT-UG10 Note: UG10 RT Location: 143333-143987 bp Feature: RT Description: RVT-UG10 Note: UG10 RT Location: 143333-143987 bp Feature: gene Location: 148856-149113 bp Feature: domain Description: INT_ICEBs1_C_like Location: 148928-149099 bp Feature: domain Description: INT_ICEBs1_C_like Location: 148928-149099 bp Feature: gene Location: 149424-149747 bp Feature: domain Description: HipB Location: 149427-149721 bp Feature: domain Description: HipB Location: 149427-149721 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), InsE (COG2963), AE_Prim_S_like (cl01287), RVT-UG10, INT_ICEBs1_C_like (cd01189), HipB (COG1396)