myRT

myRT report for GCA_003000865.1_ASM300086v1

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Seq: PSRZ01000005.1 Escherichia sp. R6 NODE_5_length_222096_cov_55.5534, whole genome shotgun sequence (222096 bp)
Overview 1 RT 1: 220157-222057 bp Neighborhood of RT #1 [220157, 222095] Asparaginase_2 RVT-GII Feature: gene Location: 220157-221188 bp Feature: domain Description: Asparaginase_2 Location: 220247-221180 bp Feature: domain Description: Asparaginase_2 Location: 220247-221 1 80 bp Feature: gene Location: 221515-221664 bp Feature: gene Location: 221712-222095 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 221955-222057 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 221 955-222057 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Asparaginase_2 (pfam01112), RVT-GII

Seq: PSRZ01000065.1 Escherichia sp. R6 NODE_65_length_2256_cov_118.794, whole genome shotgun sequence (2256 bp)
Overview 1 RT 1: 3-1919 bp Neighborhood of RT #1 [3, 2164] RVT-GII GIIM Feature: gene Location: 3-347 bp Feature: gene Location: 818-2164 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 914-1646 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 914-1646 bp Feature: domain Description: GIIM Note: maturase Location: 1721-1919 bp Feature: domain Description: GIIM Note: maturase Location: 172 1-1919 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: PSRZ01000008.1 Escherichia sp. R6 NODE_8_length_173832_cov_54.0235, whole genome shotgun sequence (173832 bp)
Overview 1 RT 1: 2-1570 bp Neighborhood of RT #1 [2, 1570] RVT-GII RVT-GII GIIM Feature: gene Location: 2-478 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 269-347 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 269-3 47 bp Feature: gene Location: 506-1027 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 512-794 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 512-794 bp Feature: domain Description: GIIM Note: maturase Location: 842-1022 bp Feature: domain Description: GIIM Note: maturase Location: 842-1022 bp Feature: gene Location: 1126-1272 bp Feature: gene Location: 1382-1570 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: PSRZ01000009.1 Escherichia sp. R6 NODE_9_length_166208_cov_53.6767, whole genome shotgun sequence (166208 bp)
Overview 1 RT 1: 137571-143602 bp Neighborhood of RT #1 [137571, 143602] AbiEii AbiEi_3_N AbiEi_3 RVT-UG5 nitrilase Phage_ASH Feature: gene Location: 137571-138491 bp Feature: domain Description: AbiEii Location: 137613-138354 bp Feature: domain Description: AbiEii Location: 137613-138354 bp Feature: gene Location: 138478-139281 bp Feature: domain Description: AbiEi_3_N Location: 138511-138772 bp Feature: domain Description: AbiEi_3_N Location: 138511-138772 bp Feature: domain Description: AbiEi_3 Location: 138784-139240 bp Feature: domain Description: AbiEi_3 Location: 138784 -13924 0 bp Feature: gene Location: 139576-142785 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 140104-140593 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 14 0104 -14 0593 bp Feature: domain Description: nitrilase Location: 142099-142696 bp Feature: domain Description: nitrilase Location: 14 2099-14 2696 bp Feature: gene Location: 142946-143086 bp Feature: domain Description: Phage_ASH Location: 142973-143066 bp Feature: domain Description: Phage_ASH Location: 14 2973-14 3066 bp Feature: gene Location: 143132-143602 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AbiEii (pfam08843), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), RVT-UG5, nitrilase (cl11424), Phage_ASH (pfam10554)