myRT

myRT report for GCA_003000975.1_ASM300097v1

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Seq: PSSM01000020.1 Escherichia sp. R20 NODE_20_length_90456_cov_60.9331, whole genome shotgun sequence (90456 bp)
Overview 1 RT 1: 28866-35109 bp Neighborhood of RT #1 [28866, 35246] Phage_integrase RVT-UG5 nitrilase AbiEi_3_N AbiEi_3 AbiEii Feature: gene Location: 28866-29132 bp Feature: domain Description: Phage_integrase Location: 28932-29028 bp Feature: domain Description: Phage_integrase Location: 28932-29028 bp Feature: gene Location: 29215-29685 bp Feature: gene Location: 30032-33241 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 30560-31049 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 30560-31 049 bp Feature: domain Description: nitrilase Location: 32555-33152 bp Feature: domain Description: nitrilase Location: 32555-331 52 bp Feature: gene Location: 33536-34339 bp Feature: domain Description: AbiEi_3_N Location: 33569-33830 bp Feature: domain Description: AbiEi_3_N Location: 33569-33830 bp Feature: domain Description: AbiEi_3 Location: 33842-34298 bp Feature: domain Description: AbiEi_3 Location: 33842-34298 bp Feature: gene Location: 34326-35246 bp Feature: domain Description: AbiEii Location: 34368-35109 bp Feature: domain Description: AbiEii Location: 34368-351 09 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_integrase (pfam00589), RVT-UG5, nitrilase (cl11424), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), AbiEii (pfam08843)

Seq: PSSM01000034.1 Escherichia sp. R20 NODE_34_length_51885_cov_58.7593, whole genome shotgun sequence (51885 bp)
Overview 1 RT 1: 26007-30290 bp Neighborhood of RT #1 [26007, 30298] RVT-GII RVT-GII GIIM YesM Feature: gene Location: 26007-26912 bp Feature: gene Location: 27170-27367 bp Feature: gene Location: 27398-27937 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27728-27806 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 772 8-2 7806 bp Feature: gene Location: 27965-28486 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27971-28253 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 7971-2 82 53 bp Feature: domain Description: GIIM Note: maturase Location: 28301-28481 bp Feature: domain Description: GIIM Note: maturase Location: 2 8301-2 8481 bp Feature: gene Location: 28808-28996 bp Feature: gene Location: 29036-30298 bp Feature: domain Description: YesM Location: 29549-30290 bp Feature: domain Description: YesM Location: 2 9549-302 90 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), YesM (COG2972)

Seq: PSSM01000091.1 Escherichia sp. R20 NODE_91_length_2272_cov_138.69, whole genome shotgun sequence (2272 bp)
Overview 1 RT 1: 1-1935 bp Neighborhood of RT #1 [1, 2180] RVT-GII GIIM Feature: gene Location: 1-363 bp Feature: gene Location: 657-2180 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 930-1662 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 93 0-1662 bp Feature: domain Description: GIIM Note: maturase Location: 1737-1935 bp Feature: domain Description: GIIM Note: maturase Location: 173 7-193 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)