myRT

myRT report for GCA_003002215.1_ASM300221v1

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Seq: PVUR01000006.1 Listeria monocytogenes strain CFSAN035164 NODE_1_length_1254855_cov_23.4313_ID_882, whole genome shotgun sequence (1254855 bp)
Overview 1 RT 1: 7222-11298 bp Neighborhood of RT #1 [7222, 11300] YdeE PRK13316 RVT-AbiP2 Arsenite_oxidase RpmF Feature: gene Location: 7222-7701 bp Feature: domain Description: YdeE Location: 7225-7696 bp Feature: domain Description: YdeE Location: 7225-7696 bp Feature: gene Location: 7736-8224 bp Feature: domain Description: PRK13316 Location: 7862-8222 bp Feature: domain Description: PRK1 331 6 Location: 7862-8222 bp Feature: gene Location: 8491-10260 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 8944-9403 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 8944-9403 bp Feature: gene Location: 10490-11065 bp Feature: domain Description: Arsenite_oxidase Location: 10502-10991 bp Feature: domain Description: Arsenite_oxidase Location: 1 0502-1 0991 bp Feature: gene Location: 11130-11300 bp Feature: domain Description: RpmF Location: 11133-11298 bp Feature: domain Description: RpmF Location: 1 1 1 33-1 1 298 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YdeE (COG3708), PRK13316 (heme oxygenase IsdG), RVT-AbiP2, Arsenite_oxidase, RpmF (COG0333)

Seq: PVUR01000013.1 Listeria monocytogenes strain CFSAN035164 NODE_4_length_257852_cov_30.1786_ID_417, whole genome shotgun sequence (257852 bp)
Overview 1 RT 1: 36689-42166 bp Neighborhood of RT #1 [36689, 42189] RVT-Retrons Trypsin sufB SUF_scaf_2 Feature: gene Location: 36689-37213 bp Feature: gene Location: 37222-38178 bp Feature: gene Location: 38318-40015 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 38480-39074 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 38480-39074 bp Feature: domain Description: Trypsin Location: 39398-39989 bp Feature: domain Description: Trypsin Location: 39398-39989 bp Feature: gene Location: 40329-41723 bp Feature: domain Description: sufB Location: 40356-41694 bp Feature: domain Description: sufB Location: 40356-41694 bp Feature: gene Location: 41746-42189 bp Feature: domain Description: SUF_scaf_2 Location: 41764-42166 bp Feature: domain Description: SUF_scaf_2 Location: 41764-42 166 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, Trypsin (pfam00089), sufB (TIGR01980), SUF_scaf_2 (TIGR01994)