myRT

myRT report for GCA_003003155.1_ASM300315v1

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Seq: PVUB01000001.1 Flavobacterium granuli strain DSM 17797 Ga0134106_101, whole genome shotgun sequence (728648 bp)
Overview 1 RT 1: 106024-112439 bp Neighborhood of RT #1 [106024, 112447] S2P-M50_SpoIVFB_CBS CBS_pair_peptidase_M50 PRK11263 RVT-Retrons MFS_LmrB_MDR_like EmrA Feature: gene Location: 106024-107127 bp Feature: domain Description: S2P-M50_SpoIVFB_CBS Location: 106048-106699 bp Feature: domain Description: S2P-M50_SpoIVFB_CBS Location: 1 06048-1 06699 bp Feature: domain Description: CBS_pair_peptidase_M50 Location: 106744-107083 bp Feature: domain Description: CBS_pair_peptidase_M50 Location: 1 06744-1 07083 bp Feature: gene Location: 107114-108277 bp Feature: domain Description: PRK11263 Location: 107150-108260 bp Feature: domain Description: PRK1 1 263 Location: 1 071 50-1 08260 bp Feature: gene Location: 108589-109773 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 108937-109489 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 08937-1 09489 bp Feature: gene Location: 109786-111378 bp Feature: domain Description: MFS_LmrB_MDR_like Location: 109930-111322 bp Feature: domain Description: MFS_LmrB_MDR_like Location: 1 09930-1 1 1 322 bp Feature: gene Location: 111386-112447 bp Feature: domain Description: EmrA Location: 111440-112439 bp Feature: domain Description: EmrA Location: 1 1 1 440-1 1 2439 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT S2P-M50_SpoIVFB_CBS (cd06164), CBS_pair_peptidase_M50 (cd04801), PRK11263 (cardiolipin synthase ClsB), RVT-Retrons, MFS_LmrB_MDR_like (cd17503), EmrA (COG1566)

Seq: PVUB01000017.1 Flavobacterium granuli strain DSM 17797 Ga0134106_117, whole genome shotgun sequence (15797 bp)
Overview 1 RT 1: 3389-8688 bp Neighborhood of RT #1 [3389, 8688] COG3547 RVT-GII GIIM SLATT_5 Feature: gene Location: 3389-3994 bp Feature: gene Location: 4128-5273 bp Feature: domain Description: COG3547 Location: 4215-5052 bp Feature: domain Description: COG3547 Location: 42 15-5052 bp Feature: gene Location: 5531-6826 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5726-6341 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 572 6-6341 bp Feature: domain Description: GIIM Note: maturase Location: 6413-6626 bp Feature: domain Description: GIIM Note: maturase Location: 6413-662 6 bp Feature: gene Location: 7610-8284 bp Feature: domain Description: SLATT_5 Location: 7661-8252 bp Feature: domain Description: SLATT_5 Location: 7661-82 52 bp Feature: gene Location: 8533-8688 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3547 (Transposase ), RVT-GII, GIIM (pfam08388), SLATT_5 (pfam18160)