myRT

myRT report for GCA_003003645.1_ASM300364v1

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Seq: PVWA01000001.1 Bacillus atrophaeus strain CKL1 NODE_1_length_1255168_cov_43.3744, whole genome shotgun sequence (1255168 bp)
Overview 1 RT 1: 1007099-1010342 bp Neighborhood of RT #1 [1007099, 1010413] RVT-GII AmpC Feature: gene Location: 1007099-1007329 bp Feature: gene Location: 1007432-1007770 bp Feature: gene Location: 1007864-1008049 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1007870-1008035 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 007870-1 008035 bp Feature: gene Location: 1008540-1008773 bp Feature: gene Location: 1009355-1010413 bp Feature: domain Description: AmpC Location: 1009517-1010342 bp Feature: domain Description: AmpC Location: 1 00951 7-1 01 0342 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, AmpC (COG1680)

Seq: PVWA01000002.1 Bacillus atrophaeus strain CKL1 NODE_2_length_1011180_cov_43.0748, whole genome shotgun sequence (1011180 bp)
Overview 1 RT 1: 917969-923370 bp Neighborhood of RT #1 [917969, 923372] HTH_45 Dimerisation2 HTH_45 RVT-AbiA SLATT_5 tRNA_RlmH_YbeA Feature: gene Location: 917969-918157 bp Feature: gene Location: 918500-920527 bp Feature: domain Description: HTH_45 Location: 918941-919055 bp Feature: domain Description: HTH_45 Location: 918941-919055 bp Feature: domain Description: Dimerisation2 Location: 919292-919424 bp Feature: domain Description: Dimerisation2 Location: 9192 92 -91942 4 bp Feature: domain Description: HTH_45 Location: 919466-919673 bp Feature: domain Description: HTH_45 Location: 919466-919673 bp Feature: gene Location: 920670-922106 bp Feature: RT Description: RVT-AbiA Note: AbiA RT Location: 921057-921510 bp Feature: RT Description: RVT-AbiA Note: AbiA RT Location: 92 1057-92 1510 bp Feature: gene Location: 922126-922758 bp Feature: domain Description: SLATT_5 Location: 922159-922741 bp Feature: domain Description: SLATT_5 Location: 92 2 159-92 2 741 bp Feature: gene Location: 922893-923372 bp Feature: domain Description: tRNA_RlmH_YbeA Location: 922899-923370 bp Feature: domain Description: tRNA_RlmH_YbeA Location: 92 2 899-92 3370 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_45 (pfam14947), Dimerisation2, RVT-AbiA, SLATT_5 (pfam18160), tRNA_RlmH_YbeA (TIGR00246)