myRT

myRT report for GCA_003004035.1_ASM300403v1

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Seq: PVVO01000010.1 Listeria monocytogenes strain CFSAN035189 NODE_4_length_287047_cov_16.4876_ID_251, whole genome shotgun sequence (287047 bp)
Overview 1 RT 1: 12929-22807 bp Neighborhood of RT #1 [12929, 22821] COG4932 CollagenBindB CollagenBindB CollagenBindB CollagenBindB CollagenBindB CollagenBindB COG4932 PRK06482 RVT-GII LysR TpcC Feature: gene Location: 12929-18685 bp Feature: domain Description: COG4932 Location: 12968-16754 bp Feature: domain Description: COG4932 Location: 1 2968-1 6754 bp Feature: domain Description: CollagenBindB Location: 16808-17090 bp Feature: domain Description: CollagenBindB Location: 1 6808-1 7090 bp Feature: domain Description: CollagenBindB Location: 17105-17381 bp Feature: domain Description: CollagenBindB Location: 1 71 05-1 7381 bp Feature: domain Description: CollagenBindB Location: 17396-17651 bp Feature: domain Description: CollagenBindB Location: 1 7396-1 7651 bp Feature: domain Description: CollagenBindB Location: 17666-17939 bp Feature: domain Description: CollagenBindB Location: 1 7666-1 7939 bp Feature: domain Description: CollagenBindB Location: 17954-18209 bp Feature: domain Description: CollagenBindB Location: 1 7954-1 8209 bp Feature: domain Description: CollagenBindB Location: 18227-18476 bp Feature: domain Description: CollagenBindB Location: 1 8227-1 8476 bp Feature: domain Description: COG4932 Location: 18509-18680 bp Feature: domain Description: COG4932 Location: 1 8509-1 8680 bp Feature: gene Location: 19358-19702 bp Feature: domain Description: PRK06482 Location: 19439-19691 bp Feature: domain Description: PRK06482 Location: 1 9439-1 9691 bp Feature: gene Location: 19597-20316 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19918-20314 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 991 8-2031 4 bp Feature: gene Location: 20852-21676 bp Feature: domain Description: LysR Location: 20855-21569 bp Feature: domain Description: LysR Location: 20855-21 569 bp Feature: gene Location: 21910-22821 bp Feature: domain Description: TpcC Location: 22141-22807 bp Feature: domain Description: TpcC Location: 221 41 -22807 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG4932 (Uncharacterized surface anchored protein ), CollagenBindB (cl15753), PRK06482 (SDR family oxidoreductase), RVT-GII, LysR (COG0583), TpcC (pfam12642)