myRT

myRT report for GCA_003004505.1_ASM300450v1

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Seq: PVXG01000085.1 Photobacterium damselae subsp. damselae strain 940804-1/2 Contig_000085, whole genome shotgun sequence (1895 bp)
Overview 1 RT 1: 37-1054 bp Neighborhood of RT #1 [37, 1281] RVT-GII GIIM Feature: gene Location: 37-1281 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 187-802 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 87-802 bp Feature: domain Description: GIIM Note: maturase Location: 853-1054 bp Feature: domain Description: GIIM Note: maturase Location: 853-1 054 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: PVXG01000113.1 Photobacterium damselae subsp. damselae strain 940804-1/2 Contig_000113, whole genome shotgun sequence (273624 bp)
Overview 1 RT 1: 64871-74084 bp Neighborhood of RT #1 [64871, 74137] PtsH PtsA PtsN RVT_N RVT-GII GIIM SIR2_2 YjgR YjgR Feature: gene Location: 64871-67372 bp Feature: domain Description: PtsH Location: 64892-65144 bp Feature: domain Description: PtsH Location: 64892 -65144 bp Feature: domain Description: PtsA Location: 65231-66917 bp Feature: domain Description: PtsA Location: 652 31-66917 bp Feature: domain Description: PtsN Location: 66932-67364 bp Feature: domain Description: PtsN Location: 66932 -67364 bp Feature: gene Location: 67793-68359 bp Feature: gene Location: 68935-70407 bp Feature: RT Description: RVT_N Location: 68983-69226 bp Feature: RT Description: RVT_N Location: 68983-692 2 6 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 69271-69898 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 692 71-69898 bp Feature: domain Description: GIIM Note: maturase Location: 69958-70183 bp Feature: domain Description: GIIM Note: maturase Location: 69958-70183 bp Feature: gene Location: 71240-72379 bp Feature: domain Description: SIR2_2 Location: 71609-72242 bp Feature: domain Description: SIR2 _2 Location: 71609-72 2 42 bp Feature: gene Location: 72389-74137 bp Feature: domain Description: YjgR Location: 72692-72983 bp Feature: domain Description: YjgR Location: 72 692 -72 983 bp Feature: domain Description: YjgR Location: 73721-74084 bp Feature: domain Description: YjgR Location: 7372 1-74084 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PtsH (COG1925), PtsA (COG1080), PtsN (COG1762), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), SIR2_2 (pfam13289), YjgR (COG0433)