myRT

myRT report for GCA_003006455.1_ASM300645v1

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Seq: PWAF01000198.1 Klebsiella pneumoniae strain PM12640 NODE_198_length_5364_cov_12.5419_ID_395, whole genome shotgun sequence (5364 bp)
Overview 1 RT 1: 1753-5275 bp Neighborhood of RT #1 [1753, 5361] N6_acetyl_AAC6 RVT-GII GIIM Arr-ms Feature: gene Location: 1753-2178 bp Feature: gene Location: 2171-2725 bp Feature: domain Description: N6_acetyl_AAC6 Location: 2174-2723 bp Feature: domain Description: N6_acetyl_AAC6 Location: 21 74-2723 bp Feature: gene Location: 3446-4699 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3638-4262 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3638-4262 bp Feature: domain Description: GIIM Note: maturase Location: 4301-4520 bp Feature: domain Description: GIIM Note: maturase Location: 4301 -4520 bp Feature: gene Location: 4780-5361 bp Feature: domain Description: Arr-ms Location: 4969-5275 bp Feature: domain Description: Arr-ms Location: 4969-5275 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT N6_acetyl_AAC6 (TIGR04431), RVT-GII, GIIM (pfam08388), Arr-ms (pfam12120)

Seq: PWAF01000006.1 Klebsiella pneumoniae strain PM12640 NODE_6_length_112370_cov_9.36237_ID_11, whole genome shotgun sequence (112370 bp)
Overview 1 RT 1: 94281-100734 bp Neighborhood of RT #1 [94281, 100734] AAA_15 RVT-Retrons Nuc_deoxyrib_tr Feature: gene Location: 94281-94586 bp Feature: gene Location: 95469-97385 bp Feature: domain Description: AAA_15 Location: 95502-96510 bp Feature: domain Description: AAA_15 Location: 95502 -96510 bp Feature: gene Location: 97861-98961 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 98044-98572 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 98044-98572 bp Feature: gene Location: 99617-100453 bp Feature: domain Description: Nuc_deoxyrib_tr Location: 100106-100277 bp Feature: domain Description: Nuc_deoxyrib_tr Location: 100106-1002 77 bp Feature: gene Location: 100483-100734 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_15 (pfam13175), RVT-Retrons, Nuc_deoxyrib_tr (pfam05014)