myRT

myRT report for GCA_003006535.1_ASM300653v1

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Seq: PWAH01000358.1 Klebsiella pneumoniae strain PM2360 NODE_358_length_2783_cov_16.9993_ID_715, whole genome shotgun sequence (2783 bp)
Overview 1 RT 1: 3-2781 bp Neighborhood of RT #1 [3, 2781] umuC PRK10276 RVT-GII Feature: gene Location: 3-176 bp Feature: domain Description: umuC Location: 6-177 bp Feature: domain Description: umuC Location: 6-1 77 bp Feature: gene Location: 176-859 bp Feature: domain Description: PRK10276 Location: 479-842 bp Feature: domain Description: PRK1 0276 Location: 479-842 bp Feature: gene Location: 1013-2500 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1418-2108 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 41 8-21 08 bp Feature: gene Location: 2623-2781 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)

Seq: PWAH01000003.1 Klebsiella pneumoniae strain PM2360 NODE_3_length_115413_cov_8.57173_ID_5, whole genome shotgun sequence (115413 bp)
Overview 1 RT 1: 11639-18091 bp Neighborhood of RT #1 [11639, 18091] Nuc_deoxyrib_tr RVT-Retrons AAA_15 Feature: gene Location: 11639-11890 bp Feature: gene Location: 11920-12756 bp Feature: domain Description: Nuc_deoxyrib_tr Location: 12409-12580 bp Feature: domain Description: Nuc_deoxyrib_tr Location: 12 409-12 580 bp Feature: gene Location: 13412-14512 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 13595-14123 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 13595-1412 3 bp Feature: gene Location: 14627-16873 bp Feature: domain Description: AAA_15 Location: 14630-15638 bp Feature: domain Description: AAA_15 Location: 14630-15638 bp Feature: gene Location: 17786-18091 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Nuc_deoxyrib_tr (pfam05014), RVT-Retrons, AAA_15 (pfam13175)