myRT

myRT report for GCA_003007955.1_ASM300795v1

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Seq: PVPE01000005.1 Escherichia coli strain BA14396 NODE_24_length_66016_cov_44.534_ID_47, whole genome shotgun sequence (66016 bp)
Overview 1 RT 1: 4767-11010 bp Neighborhood of RT #1 [4767, 11147] Phage_integrase RVT-UG5 nitrilase AbiEi_3_N AbiEi_3 AbiEii Feature: gene Location: 4767-5033 bp Feature: domain Description: Phage_integrase Location: 4833-4929 bp Feature: domain Description: Phage_integrase Location: 4833-4929 bp Feature: gene Location: 5116-5586 bp Feature: gene Location: 5933-9142 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 6461-6950 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 6461 -6950 bp Feature: domain Description: nitrilase Location: 8456-9053 bp Feature: domain Description: nitrilase Location: 8456-9053 bp Feature: gene Location: 9437-10240 bp Feature: domain Description: AbiEi_3_N Location: 9470-9731 bp Feature: domain Description: AbiEi_3_N Location: 9470-9731 bp Feature: domain Description: AbiEi_3 Location: 9743-10199 bp Feature: domain Description: AbiEi_3 Location: 9743-1 01 99 bp Feature: gene Location: 10227-11147 bp Feature: domain Description: AbiEii Location: 10269-11010 bp Feature: domain Description: AbiEii Location: 1 0269-1 1 01 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_integrase (pfam00589), RVT-UG5, nitrilase (cl11424), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), AbiEii (pfam08843)

Seq: PVPE01000098.1 Escherichia coli strain BA14396 NODE_40_length_43579_cov_51.7502_ID_79, whole genome shotgun sequence (43579 bp)
Overview 1 RT 1: 32598-35837 bp Neighborhood of RT #1 [32598, 35845] group_II_RT_mat RVT-GII RVT-GII GIIM YesM Feature: gene Location: 32598-32789 bp Feature: gene Location: 32946-33296 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 33108-33252 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 33108-332 52 bp Feature: gene Location: 33266-33484 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 33275-33353 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 332 75-33353 bp Feature: gene Location: 33512-34033 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 33518-33800 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 33518-33800 bp Feature: domain Description: GIIM Note: maturase Location: 33848-34028 bp Feature: domain Description: GIIM Note: maturase Location: 33848-3402 8 bp Feature: gene Location: 34355-34543 bp Feature: gene Location: 34583-35845 bp Feature: domain Description: YesM Location: 35096-35837 bp Feature: domain Description: YesM Location: 35096-35837 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT group_II_RT_mat (TIGR04416), RVT-GII, GIIM (pfam08388), YesM (COG2972)