myRT

myRT report for GCA_003008115.1_ASM300811v1

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Seq: PVPP01000043.1 Escherichia coli strain BA7132 NODE_20_length_74038_cov_46.4621_ID_39, whole genome shotgun sequence (74038 bp)
Overview 1 RT 1: 61888-68340 bp Neighborhood of RT #1 [61888, 68340] AAA_15 RVT-Retrons Nuc_deoxyrib_tr Feature: gene Location: 61888-62193 bp Feature: gene Location: 63076-65352 bp Feature: domain Description: AAA_15 Location: 63109-64117 bp Feature: domain Description: AAA_1 5 Location: 631 09-641 1 7 bp Feature: gene Location: 65467-66567 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 65650-66178 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 65650-661 78 bp Feature: gene Location: 67223-68059 bp Feature: domain Description: Nuc_deoxyrib_tr Location: 67712-67883 bp Feature: domain Description: Nuc_deoxyrib_tr Location: 6771 2-67883 bp Feature: gene Location: 68089-68340 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_15 (pfam13175), RVT-Retrons, Nuc_deoxyrib_tr (pfam05014)

Seq: PVPP01000094.1 Escherichia coli strain BA7132 NODE_64_length_17931_cov_88.8088_ID_127, whole genome shotgun sequence (17931 bp)
Overview 1 RT 1: 10829-14718 bp Neighborhood of RT #1 [10829, 14723] RVT-GII RVT-GII GIIM LacI PBP1_GntR Feature: gene Location: 10829-11143 bp Feature: gene Location: 11541-11738 bp Feature: gene Location: 11907-12341 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12099-12315 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 099-12 315 bp Feature: gene Location: 12314-12967 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12317-12725 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 317-12 72 5 bp Feature: domain Description: GIIM Note: maturase Location: 12773-12965 bp Feature: domain Description: GIIM Note: maturase Location: 12 773-12 965 bp Feature: gene Location: 13343-13561 bp Feature: gene Location: 13692-14723 bp Feature: domain Description: LacI Location: 13734-13869 bp Feature: domain Description: LacI Location: 13734-13869 bp Feature: domain Description: PBP1_GntR Location: 13908-14718 bp Feature: domain Description: PBP1_GntR Location: 13908-14718 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), LacI (pfam00356), PBP1_GntR (cd01575)