myRT

myRT report for GCA_003008235.1_ASM300823v1

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Seq: PVPD01000004.1 Escherichia coli strain B17565 NODE_17_length_88687_cov_41.7077_ID_33, whole genome shotgun sequence (88687 bp)
Overview 1 RT 1: 27437-33680 bp Neighborhood of RT #1 [27437, 33817] Phage_integrase RVT-UG5 nitrilase AbiEi_3_N AbiEi_3 AbiEii Feature: gene Location: 27437-27703 bp Feature: domain Description: Phage_integrase Location: 27503-27599 bp Feature: domain Description: Phage_integrase Location: 27503-27599 bp Feature: gene Location: 27786-28256 bp Feature: gene Location: 28603-31812 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 29131-29620 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 291 31 -29620 bp Feature: domain Description: nitrilase Location: 31126-31723 bp Feature: domain Description: nitrilase Location: 31 1 26-31 723 bp Feature: gene Location: 32107-32910 bp Feature: domain Description: AbiEi_3_N Location: 32140-32401 bp Feature: domain Description: AbiEi_3_N Location: 321 40-32401 bp Feature: domain Description: AbiEi_3 Location: 32413-32869 bp Feature: domain Description: AbiEi_3 Location: 3241 3-32869 bp Feature: gene Location: 32897-33817 bp Feature: domain Description: AbiEii Location: 32939-33680 bp Feature: domain Description: AbiEii Location: 32939-33680 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_integrase (pfam00589), RVT-UG5, nitrilase (cl11424), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), AbiEii (pfam08843)

Seq: PVPD01000094.1 Escherichia coli strain B17565 NODE_39_length_43552_cov_51.0525_ID_77, whole genome shotgun sequence (43552 bp)
Overview 1 RT 1: 7735-12026 bp Neighborhood of RT #1 [7735, 12026] YesM RVT-GII GIIM RVT-GII Feature: gene Location: 7735-8997 bp Feature: domain Description: YesM Location: 8248-8989 bp Feature: domain Description: YesM Location: 82 48-8989 bp Feature: gene Location: 9027-9197 bp Feature: gene Location: 9547-10068 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9553-9835 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9553-9835 bp Feature: domain Description: GIIM Note: maturase Location: 9883-10063 bp Feature: domain Description: GIIM Note: maturase Location: 9883-10063 bp Feature: gene Location: 10096-10635 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10426-10504 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1042 6-10504 bp Feature: gene Location: 10666-10863 bp Feature: gene Location: 11121-12026 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YesM (COG2972), RVT-GII, GIIM (pfam08388)