myRT

myRT report for GCA_003008315.1_ASM300831v1

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Seq: PVPU01000045.1 Escherichia coli strain B24621 NODE_18_length_85794_cov_32.0231_ID_35, whole genome shotgun sequence (85794 bp)
Overview 1 RT 1: 6332-12799 bp Neighborhood of RT #1 [6332, 12799] PinE RVT-GII Feature: gene Location: 6332-6550 bp Feature: domain Description: PinE Location: 6335-6542 bp Feature: domain Description: PinE Location: 6335-6542 bp Feature: gene Location: 6585-6956 bp Feature: gene Location: 6842-8329 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7247-7937 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7247-7937 bp Feature: gene Location: 8380-8613 bp Feature: gene Location: 8762-12799 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PinE (COG1961), RVT-GII

Seq: PVPU01000076.1 Escherichia coli strain B24621 NODE_21_length_77286_cov_41.3151_ID_41, whole genome shotgun sequence (77286 bp)
Overview 1 RT 1: 73264-76349 bp Neighborhood of RT #1 [73264, 76390] RVT-Retrons Arm-DNA-bind_3 Feature: gene Location: 73264-73413 bp Feature: gene Location: 73713-74699 bp Feature: gene Location: 74701-75633 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 74803-75397 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 74803-75397 bp Feature: gene Location: 75659-75904 bp Feature: gene Location: 76088-76390 bp Feature: domain Description: Arm-DNA-bind_3 Location: 76097-76349 bp Feature: domain Description: Arm-DNA-bind_3 Location: 76097-76349 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, Arm-DNA-bind_3 (pfam13356)

Seq: PVPU01000005.1 Escherichia coli strain B24621 NODE_82_length_2272_cov_181.526_ID_163, whole genome shotgun sequence (2272 bp)
Overview 1 RT 1: 1-1935 bp Neighborhood of RT #1 [1, 2180] RVT-GII GIIM Feature: gene Location: 1-363 bp Feature: gene Location: 657-2180 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 930-1662 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 93 0-1662 bp Feature: domain Description: GIIM Note: maturase Location: 1737-1935 bp Feature: domain Description: GIIM Note: maturase Location: 173 7-193 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: PVPU01000051.1 Escherichia coli strain B24621 NODE_9_length_181420_cov_37.9106_ID_17, whole genome shotgun sequence (181420 bp)
Overview 1 RT 1: 153114-157396 bp Neighborhood of RT #1 [153114, 157404] RVT-GII RVT-GII GIIM YesM Feature: gene Location: 153114-154019 bp Feature: gene Location: 154156-154347 bp Feature: gene Location: 154504-155043 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 154834-154912 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 154 834 -154 912 bp Feature: gene Location: 155071-155592 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 155077-155359 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 155077-155359 bp Feature: domain Description: GIIM Note: maturase Location: 155407-155587 bp Feature: domain Description: GIIM Note: maturase Location: 1554 07-155587 bp Feature: gene Location: 155914-156102 bp Feature: gene Location: 156142-157404 bp Feature: domain Description: YesM Location: 156655-157396 bp Feature: domain Description: YesM Location: 156655-157396 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), YesM (COG2972)