myRT

myRT report for GCA_003009435.1_ASM300943v1

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Seq: PGKC01000017.1 Escherichia coli strain 10f54 NODE_17_length_96025_cov_184.531, whole genome shotgun sequence (96025 bp)
Overview 1 RT 1: 45684-53406 bp Neighborhood of RT #1 [45684, 53525] prfC SLATT_5 RVT-UG17 Caudo_TAP phage_tail_N Phage_fiber_2 Phage_fiber_2 Phage_fiber_2 Collar Phage_fiber Phage_fiber Phage_fiber Phage_fiber Feature: gene Location: 45684-47270 bp Feature: domain Description: prfC Location: 45702-47268 bp Feature: domain Description: prfC Location: 45702-47268 bp Feature: gene Location: 47801-48505 bp Feature: domain Description: SLATT_5 Location: 47963-48473 bp Feature: domain Description: SLATT_5 Location: 47963-48473 bp Feature: gene Location: 48483-49853 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 48711-49317 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 4871 1 -4931 7 bp Feature: gene Location: 49966-50550 bp Feature: domain Description: Caudo_TAP Location: 50182-50539 bp Feature: domain Description: Caudo_TAP Location: 501 82-50539 bp Feature: gene Location: 50550-53525 bp Feature: domain Description: phage_tail_N Location: 50553-50952 bp Feature: domain Description: phage_tail_N Location: 50553-50952 bp Feature: domain Description: Phage_fiber_2 Location: 51936-52056 bp Feature: domain Description: Phage_fiber_2 Location: 51 936-52056 bp Feature: domain Description: Phage_fiber_2 Location: 52068-52188 bp Feature: domain Description: Phage_fiber_2 Location: 52068-521 88 bp Feature: domain Description: Phage_fiber_2 Location: 52200-52317 bp Feature: domain Description: Phage_fiber_2 Location: 52200-5231 7 bp Feature: domain Description: Collar Location: 52833-52971 bp Feature: domain Description: Collar Location: 52833-52971 bp Feature: domain Description: Phage_fiber Location: 53022-53061 bp Feature: domain Description: Phage_fiber Location: 53022-53061 bp Feature: domain Description: Phage_fiber Location: 53118-53157 bp Feature: domain Description: Phage_fiber Location: 531 1 8-531 57 bp Feature: domain Description: Phage_fiber Location: 53331-53367 bp Feature: domain Description: Phage_fiber Location: 53331 -53367 bp Feature: domain Description: Phage_fiber Location: 53373-53406 bp Feature: domain Description: Phage_fiber Location: 53373-53406 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT prfC (TIGR00503), SLATT_5 (pfam18160), RVT-UG17, Caudo_TAP (pfam02413), phage_tail_N (pfam08400), Phage_fiber_2 (pfam03406), Collar (pfam07484), Phage_fiber (pfam03335)

Seq: PGKC01000035.1 Escherichia coli strain 10f54 NODE_35_length_32772_cov_64.2511, whole genome shotgun sequence (32772 bp)
Overview 1 RT 1: 29114-32285 bp Neighborhood of RT #1 [29114, 32287] PRK10276 RVT-GII DDE_Tnp_IS1 Feature: gene Location: 29114-29797 bp Feature: domain Description: PRK10276 Location: 29417-29780 bp Feature: domain Description: PRK102 76 Location: 2 9417-2 9780 bp Feature: gene Location: 29851-30453 bp Feature: gene Location: 30428-31438 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 30434-31046 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 30434-31046 bp Feature: gene Location: 31561-31773 bp Feature: gene Location: 31784-32287 bp Feature: domain Description: DDE_Tnp_IS1 Location: 31895-32285 bp Feature: domain Description: DDE_Tnp_IS1 Location: 31895-32 2 85 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, DDE_Tnp_IS1 (pfam03400)