myRT

myRT report for GCA_003009725.1_ASM300972v1

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Seq: PKMY01000104.1 Escherichia coli strain 8-19 NODE_20_length_82144_cov_96.7451, whole genome shotgun sequence (82144 bp)
Overview 1 RT 1: 64303-69148 bp Neighborhood of RT #1 [64303, 69148] DUF3987 Inovirus_Gp2 RVT-GII Feature: gene Location: 64303-65736 bp Feature: domain Description: DUF3987 Location: 64396-65473 bp Feature: domain Description: DUF3987 Location: 64396-65473 bp Feature: gene Location: 66594-67157 bp Feature: domain Description: Inovirus_Gp2 Location: 66651-67092 bp Feature: domain Description: Inovirus_Gp2 Location: 66651 -67092 bp Feature: gene Location: 67483-68646 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 67597-68284 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 67597-68284 bp Feature: gene Location: 68633-68941 bp Feature: gene Location: 68975-69148 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF3987 (pfam13148), Inovirus_Gp2 (pfam11726), RVT-GII

Seq: PKMY01000083.1 Escherichia coli strain 8-19 NODE_41_length_23719_cov_98.2808, whole genome shotgun sequence (23719 bp)
Overview 1 RT 1: 11442-17134 bp Neighborhood of RT #1 [11442, 17592] InsE PHA02517 RVT-GII GIIM PHA02517 HsdM Feature: gene Location: 11442-11768 bp Feature: domain Description: InsE Location: 11445-11766 bp Feature: domain Description: InsE Location: 11445-11766 bp Feature: gene Location: 11768-12247 bp Feature: domain Description: PHA02517 Location: 11828-12182 bp Feature: domain Description: PHA02 517 Location: 1182 8-12 182 bp Feature: gene Location: 13016-14362 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13112-13844 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13112 -13844 bp Feature: domain Description: GIIM Note: maturase Location: 13919-14117 bp Feature: domain Description: GIIM Note: maturase Location: 13919-14117 bp Feature: gene Location: 14527-14910 bp Feature: domain Description: PHA02517 Location: 14530-14905 bp Feature: domain Description: PHA02 517 Location: 14530-14905 bp Feature: gene Location: 15133-17592 bp Feature: domain Description: HsdM Location: 15190-17134 bp Feature: domain Description: HsdM Location: 15190-17134 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), HsdM (COG0286)

Seq: PKMY01000079.1 Escherichia coli strain 8-19 NODE_45_length_13928_cov_100.914, whole genome shotgun sequence (13928 bp)
Overview 1 RT 1: 10375-13775 bp Neighborhood of RT #1 [10375, 13798] RVT-UG7 PRK09692 Feature: gene Location: 10375-10515 bp Feature: gene Location: 10625-11365 bp Feature: gene Location: 11362-12990 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 11770-12199 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 11770-12199 bp Feature: gene Location: 12983-13798 bp Feature: domain Description: PRK09692 Location: 12995-13775 bp Feature: domain Description: PRK09692 Location: 12995-13 775 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG7, PRK09692 (Integrase; provisional)