myRT

myRT report for GCA_003009875.1_ASM300987v1

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Seq: PGKP01000280.1 Escherichia coli strain CF10 NODE_280_length_844_cov_2.60948, whole genome shotgun sequence (844 bp)
Overview 1 RT 1: 3-555 bp Neighborhood of RT #1 [3, 617] RVT-GII Feature: gene Location: 3-617 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 99-555 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 99-555 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: PGKP01000287.1 Escherichia coli strain CF10 NODE_287_length_822_cov_1.76115, whole genome shotgun sequence (822 bp)
Overview 1 RT 1: 3-669 bp Neighborhood of RT #1 [3, 821] RVT-UG7 Feature: gene Location: 3-821 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 240-669 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 2 40-669 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG7

Seq: PGKP01000065.1 Escherichia coli strain CF10 NODE_65_length_2344_cov_296.585, whole genome shotgun sequence (2344 bp)
Overview 1 RT 1: 2-2227 bp Neighborhood of RT #1 [2, 2262] RVT_N RVT-GII GIIM HNHc Feature: gene Location: 2-145 bp Feature: gene Location: 595-2262 bp Feature: domain Description: RVT_N Location: 643-880 bp Feature: domain Description: RVT_N Location: 643 -880 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 931-1573 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 93 1-1573 bp Feature: domain Description: GIIM Note: maturase Location: 1624-1858 bp Feature: domain Description: GIIM Note: maturase Location: 1624-1858 bp Feature: domain Description: HNHc Note: nucleases Location: 2068-2227 bp Feature: domain Description: HNHc Note: nucleases Location: 2068-2227 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: PGKP01000077.1 Escherichia coli strain CF10 NODE_77_length_1916_cov_2.29011, whole genome shotgun sequence (1916 bp)
Overview 1 RT 1: 2-1913 bp Neighborhood of RT #1 [2, 1913] RVT-GII Feature: gene Location: 2-325 bp Feature: gene Location: 312-1475 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 426-1113 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4 26-1113 bp Feature: gene Location: 1622-1768 bp Feature: gene Location: 1770-1913 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII