myRT

myRT report for GCA_003009885.1_ASM300988v1

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Seq: PGKQ01001402.1 Escherichia coli strain sc12-91 NODE_1406_length_411_cov_0.75, whole genome shotgun sequence (411 bp)
Overview 1 RT 1: 2-407 bp Neighborhood of RT #1 [2, 409] RVT-GII Feature: gene Location: 2-409 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 338-407 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 338-407 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: PGKQ01000179.1 Escherichia coli strain sc12-91 NODE_179_length_3420_cov_4.32706, whole genome shotgun sequence (3420 bp)
Overview 1 RT 1: 130-3303 bp Neighborhood of RT #1 [130, 3303] PRK09692 RVT-UG7 Feature: gene Location: 130-945 bp Feature: domain Description: PRK09692 Location: 142-922 bp Feature: domain Description: PRK09692 Location: 142 -92 2 bp Feature: gene Location: 938-2566 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 1346-1775 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 1346-1775 bp Feature: gene Location: 2563-3303 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09692 (Integrase; provisional), RVT-UG7

Seq: PGKQ01000189.1 Escherichia coli strain sc12-91 NODE_189_length_3165_cov_5.0102, whole genome shotgun sequence (3165 bp)
Overview 1 RT 1: 1-2703 bp Neighborhood of RT #1 [1, 2948] InsE PHA02517 RVT-GII GIIM Feature: gene Location: 1-354 bp Feature: domain Description: InsE Location: 31-352 bp Feature: domain Description: InsE Location: 3 1-3 52 bp Feature: gene Location: 354-833 bp Feature: domain Description: PHA02517 Location: 414-768 bp Feature: domain Description: PHA02517 Location: 414-768 bp Feature: gene Location: 1602-2948 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1698-2430 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1698-243 0 bp Feature: domain Description: GIIM Note: maturase Location: 2505-2703 bp Feature: domain Description: GIIM Note: maturase Location: 2505-2703 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: PGKQ01000396.1 Escherichia coli strain sc12-91 NODE_396_length_1097_cov_1.88763, whole genome shotgun sequence (1097 bp)
Overview 1 RT 1: 78-948 bp Neighborhood of RT #1 [78, 1094] RVT-GII GIIM Feature: gene Location: 78-1094 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 81-663 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 81-663 bp Feature: domain Description: GIIM Note: maturase Location: 714-948 bp Feature: domain Description: GIIM Note: maturase Location: 714 -94 8 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: PGKQ01000070.1 Escherichia coli strain sc12-91 NODE_70_length_12109_cov_3.501, whole genome shotgun sequence (12109 bp)
Overview 1 RT 1: 1685-4168 bp Neighborhood of RT #1 [1685, 4233] RVT-GII Inovirus_Gp2 Feature: gene Location: 1685-1852 bp Feature: gene Location: 1886-2194 bp Feature: gene Location: 2181-3344 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2295-2982 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2295 -2982 bp Feature: gene Location: 3491-3637 bp Feature: gene Location: 3670-4233 bp Feature: domain Description: Inovirus_Gp2 Location: 3727-4168 bp Feature: domain Description: Inovirus_Gp2 Location: 3727-4168 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Inovirus_Gp2 (pfam11726)