myRT

myRT report for GCA_003009915.1_ASM300991v1

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Seq: PGKS01000187.1 Escherichia coli strain 13h3 NODE_187_length_1780_cov_1.32426, whole genome shotgun sequence (1780 bp)
Overview 1 RT 1: 2-1740 bp Neighborhood of RT #1 [2, 1740] RVT-GII Feature: gene Location: 2-184 bp Feature: gene Location: 253-1263 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 259-871 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 259-871 bp Feature: gene Location: 1375-1740 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: PGKS01000362.1 Escherichia coli strain 13h3 NODE_362_length_863_cov_1.67935, whole genome shotgun sequence (863 bp)
Overview 1 RT 1: 2-834 bp Neighborhood of RT #1 [2, 860] RVT-UG7 INT_P4_C Feature: gene Location: 2-709 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 410-710 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 410-710 bp Feature: gene Location: 702-860 bp Feature: domain Description: INT_P4_C Location: 708-834 bp Feature: domain Description: INT_P4_C Location: 708-834 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG7, INT_P4_C (cd00801)

Seq: PGKS01000660.1 Escherichia coli strain 13h3 NODE_660_length_539_cov_1.29612, whole genome shotgun sequence (539 bp)
Overview 1 RT 1: 3-423 bp Neighborhood of RT #1 [3, 536] RVT-GII Feature: gene Location: 3-536 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6-423 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6-423 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: PGKS01000077.1 Escherichia coli strain 13h3 NODE_77_length_13177_cov_33.1528, whole genome shotgun sequence (13177 bp)
Overview 1 RT 1: 3700-11491 bp Neighborhood of RT #1 [3700, 11514] RVT-GII GIIM ESPR Peptidase_S6 autotrans_barl EspF EspF Feature: gene Location: 3700-3981 bp Feature: gene Location: 4071-4244 bp Feature: gene Location: 5263-6489 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5464-6118 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 54 64 -6118 bp Feature: domain Description: GIIM Note: maturase Location: 6196-6418 bp Feature: domain Description: GIIM Note: maturase Location: 6196-64 18 bp Feature: gene Location: 6972-10955 bp Feature: domain Description: ESPR Location: 7017-7083 bp Feature: domain Description: ESPR Location: 7017-7083 bp Feature: domain Description: Peptidase_S6 Location: 7179-8529 bp Feature: domain Description: Peptidase_S6 Location: 7179-8529 bp Feature: domain Description: autotrans_barl Location: 9729-10953 bp Feature: domain Description: autotrans_barl Location: 9729-10953 bp Feature: gene Location: 11047-11514 bp Feature: domain Description: EspF Location: 11299-11353 bp Feature: domain Description: EspF Location: 11299-11353 bp Feature: domain Description: EspF Location: 11356-11491 bp Feature: domain Description: EspF Location: 11356-114 91 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), ESPR (pfam13018), Peptidase_S6 (pfam02395), autotrans_barl (TIGR01414), EspF (pfam04806)