myRT

myRT report for GCA_003010355.1_ASM301035v1

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Seq: PGLN01000152.1 Escherichia coli strain EZZ1-6 NODE_152_length_2075_cov_253.536, whole genome shotgun sequence (2075 bp)
Overview 1 RT 1: 2-1891 bp Neighborhood of RT #1 [2, 2073] RVT-GII GIIM Feature: gene Location: 2-319 bp Feature: gene Location: 613-2073 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 886-1618 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 886-1 61 8 bp Feature: domain Description: GIIM Note: maturase Location: 1693-1891 bp Feature: domain Description: GIIM Note: maturase Location: 1 693-1 891 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: PGLN01000381.1 Escherichia coli strain EZZ1-6 NODE_382_length_417_cov_0.848276, whole genome shotgun sequence (417 bp)
Overview 1 RT 1: 2-359 bp Neighborhood of RT #1 [2, 385] RVT-GII Feature: gene Location: 2-385 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 143-359 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 143-359 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: PGLN01000005.1 Escherichia coli strain EZZ1-6 NODE_5_length_163995_cov_101.504, whole genome shotgun sequence (163995 bp)
Overview 1 RT 1: 135359-141390 bp Neighborhood of RT #1 [135359, 141390] AbiEii AbiEi_3_N AbiEi_3 RVT-UG5 nitrilase Phage_ASH Feature: gene Location: 135359-136279 bp Feature: domain Description: AbiEii Location: 135401-136142 bp Feature: domain Description: AbiEii Location: 13 5401-13 6142 bp Feature: gene Location: 136266-137069 bp Feature: domain Description: AbiEi_3_N Location: 136299-136560 bp Feature: domain Description: AbiEi_3 _N Location: 13 6299-13 6560 bp Feature: domain Description: AbiEi_3 Location: 136572-137028 bp Feature: domain Description: AbiEi_3 Location: 13 6572-13 7028 bp Feature: gene Location: 137364-140573 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 137892-138381 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 13 7892-13 83 81 bp Feature: domain Description: nitrilase Location: 139887-140484 bp Feature: domain Description: nitrilase Location: 13 9887-140484 bp Feature: gene Location: 140734-140874 bp Feature: domain Description: Phage_ASH Location: 140761-140854 bp Feature: domain Description: Phage_ASH Location: 140761-140854 bp Feature: gene Location: 140920-141390 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AbiEii (pfam08843), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), RVT-UG5, nitrilase (cl11424), Phage_ASH (pfam10554)