myRT

myRT report for GCA_003013485.1_ASM301348v1

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Seq: PXZC01000022.1 Vibrio cholerae strain 2044 NODE_22_length_7350_cov_109.271, whole genome shotgun sequence (7350 bp)
Overview 1 RT 1: 770-4909 bp Neighborhood of RT #1 [770, 4941] RVT-UG14 Nudix_Hydrolase_7 Feature: gene Location: 770-1444 bp Feature: gene Location: 1594-2154 bp Feature: gene Location: 2290-3855 bp Feature: RT Description: RVT-UG14 Note: UG14 RT Location: 2725-3202 bp Feature: RT Description: RVT-UG1 4 Note: UG1 4 RT Location: 2725-3202 bp Feature: gene Location: 3996-4343 bp Feature: gene Location: 4504-4941 bp Feature: domain Description: Nudix_Hydrolase_7 Location: 4516-4909 bp Feature: domain Description: Nudix_Hydrolase_7 Location: 451 6-4909 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG14, Nudix_Hydrolase_7 (cd04664)

Seq: PXZC01000004.1 Vibrio cholerae strain 2044 NODE_4_length_377339_cov_107.84, whole genome shotgun sequence (377339 bp)
Overview 1 RT 1: 123530-128765 bp Neighborhood of RT #1 [123530, 128791] TIGR02646 COG3950 RVT-Retrons LysR Feature: gene Location: 123530-124147 bp Feature: domain Description: TIGR02646 Location: 123641-124025 bp Feature: domain Description: TIGR02 646 Location: 12 3641-12 402 5 bp Feature: gene Location: 124160-125782 bp Feature: domain Description: COG3950 Location: 124346-125777 bp Feature: domain Description: COG3950 Location: 12 4346-12 5777 bp Feature: gene Location: 125783-126730 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 125897-126494 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 12 5897-12 6494 bp Feature: gene Location: 127656-127928 bp Feature: gene Location: 127931-128791 bp Feature: domain Description: LysR Location: 127937-128765 bp Feature: domain Description: LysR Location: 12 7937-12 8765 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TIGR02646 (TIGR02646 family protein), COG3950 (Predicted ATP-binding protein involved in virulence ), RVT-Retrons, LysR (COG0583)