myRT

myRT report for GCA_003014445.1_ASM301444v1

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Seq: PYGH01000004.1 Fusobacterium naviforme strain ATCC 25832 EI53DRAFT_scaffold00004.4, whole genome shotgun sequence (175413 bp)
Overview 1 RT 1: 119469-121981 bp Neighborhood of RT #1 [119469, 121981] RVT-DGRs Feature: gene Location: 119469-119798 bp Feature: gene Location: 119809-119997 bp Feature: gene Location: 120110-120502 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 120113-120266 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1 201 1 3-1 20266 bp Feature: gene Location: 120578-121621 bp Feature: gene Location: 121637-121981 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: PYGH01000006.1 Fusobacterium naviforme strain ATCC 25832 EI53DRAFT_scaffold00006.6, whole genome shotgun sequence (107498 bp)
Overview 1 RT 1: 10441-15673 bp Neighborhood of RT #1 [10441, 15673] PrgI RVT-GII HNHc Maff2 Feature: gene Location: 10441-10866 bp Feature: domain Description: PrgI Location: 10462-10732 bp Feature: domain Description: PrgI Location: 10462 -10732 bp Feature: gene Location: 10924-11790 bp Feature: gene Location: 12151-13896 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12346-13084 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 346-13084 bp Feature: domain Description: HNHc Note: nucleases Location: 13630-13780 bp Feature: domain Description: HNHc Note: nucleases Location: 13630-13780 bp Feature: gene Location: 14763-14894 bp Feature: domain Description: Maff2 Location: 14766-14892 bp Feature: domain Description: Maff2 Location: 14766-14892 bp Feature: gene Location: 15137-15673 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PrgI (pfam12666), RVT-GII, HNHc (smart00507), Maff2 (pfam12750)

Seq: PYGH01000011.1 Fusobacterium naviforme strain ATCC 25832 EI53DRAFT_scaffold00011.11, whole genome shotgun sequence (73326 bp)
Overview 1 RT 1: 49320-53211 bp Neighborhood of RT #1 [49320, 53270] FGE-sulfatase Avd_like RVT-DGRs Sec34 Zn-ribbon_8 Zn-ribbon_8 Feature: gene Location: 49320-50390 bp Feature: domain Description: FGE-sulfatase Location: 49590-49914 bp Feature: domain Description: FGE-sulfatase Location: 49590-49914 bp Feature: gene Location: 50568-50927 bp Feature: domain Description: Avd_like Location: 50601-50904 bp Feature: domain Description: Avd_like Location: 50601-50904 bp Feature: gene Location: 51234-52349 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 51453-52101 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 51453 -52101 bp Feature: gene Location: 52392-52856 bp Feature: domain Description: Sec34 Location: 52518-52788 bp Feature: domain Description: Sec3 4 Location: 52518-52788 bp Feature: gene Location: 53043-53270 bp Feature: domain Description: Zn-ribbon_8 Location: 53055-53118 bp Feature: domain Description: Zn-ribbon_8 Location: 53 055-53 118 bp Feature: domain Description: Zn-ribbon_8 Location: 53172-53211 bp Feature: domain Description: Zn-ribbon_8 Location: 53 172-53 211 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FGE-sulfatase (pfam03781), Avd_like (cd16376), RVT-DGRs, Sec34 (pfam04136), Zn-ribbon_8 (pfam09723)