myRT

myRT report for GCA_003017785.1_ASM301778v1

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Seq: PYEQ01000359.1 Filamentous cyanobacterium CCP5 NODE_1158_length_5349_cov_4.2371_ID_112677, whole genome shotgun sequence (5349 bp)
Overview 1 RT 1: 3-5328 bp Neighborhood of RT #1 [3, 5348] RVT-DGRs Avd_like HEAT HEAT YfmG Feature: gene Location: 3-293 bp Feature: gene Location: 335-751 bp Feature: gene Location: 982-2040 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1186-1834 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1 1 86-1 834 bp Feature: gene Location: 2037-2447 bp Feature: domain Description: Avd_like Location: 2118-2424 bp Feature: domain Description: Avd_like Location: 21 1 8-2424 bp Feature: gene Location: 2565-5348 bp Feature: domain Description: HEAT Location: 3126-3705 bp Feature: domain Description: HEAT Location: 31 26-3705 bp Feature: domain Description: HEAT Location: 4077-4485 bp Feature: domain Description: HEAT Location: 4077-4485 bp Feature: domain Description: YfmG Location: 4581-5328 bp Feature: domain Description: YfmG Location: 4581 -5328 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Avd_like (cd16376), HEAT (sd00044), YfmG (COG1262), RVT-DGRs

Seq: PYEQ01000614.1 Filamentous cyanobacterium CCP5 NODE_2105_length_3135_cov_3.14127_ID_140400, whole genome shotgun sequence (3082 bp)
Overview 1 RT 1: 71-2989 bp Neighborhood of RT #1 [71, 3003] RVT_N RVT-GII GIIM HNHc Feature: gene Location: 71-274 bp Feature: gene Location: 405-644 bp Feature: gene Location: 1345-3003 bp Feature: RT Description: RVT_N Location: 1381-1627 bp Feature: RT Description: RVT_N Location: 1381-162 7 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1675-2314 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1675-2 314 bp Feature: domain Description: GIIM Note: maturase Location: 2395-2626 bp Feature: domain Description: GIIM Note: maturase Location: 2 395-2 62 6 bp Feature: domain Description: HNHc Note: nucleases Location: 2833-2989 bp Feature: domain Description: HNHc Note: nucleases Location: 2 833-2 989 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)