myRT

myRT report for GCA_003021405.1_ASM302140v1

Download annotations/find similar RTs

Seq: PXQB01000174.1 Cyanobacteria bacterium SW_5_48_44 sw_5_scaffold_48, whole genome shotgun sequence (40313 bp)
Overview 1 RT 1: 100-2665 bp Neighborhood of RT #1 [100, 2665] RVT-GII GIIM McrA MDR1 Feature: gene Location: 100-1095 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 124-349 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 24-349 bp Feature: domain Description: GIIM Note: maturase Location: 448-682 bp Feature: domain Description: GIIM Note: maturase Location: 448-682 bp Feature: domain Description: McrA Location: 802-1078 bp Feature: domain Description: McrA Location: 802-1 078 bp Feature: gene Location: 1459-2406 bp Feature: domain Description: MDR1 Location: 1474-2392 bp Feature: domain Description: MDR1 Location: 1 474-2392 bp Feature: gene Location: 2501-2665 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), McrA (COG4058), MDR1 (cd08267)

Seq: PXQB01000179.1 Cyanobacteria bacterium SW_5_48_44 sw_5_scaffold_496, whole genome shotgun sequence (12813 bp)
Overview 1 RT 1: 111-6135 bp Neighborhood of RT #1 [111, 6539] Cas2_I_II_III RVT-CRISPR Cas1_I-II-III Cas10_III Feature: gene Location: 111-239 bp Feature: gene Location: 416-694 bp Feature: domain Description: Cas2_I_II_III Location: 425-656 bp Feature: domain Description: Cas2 _I_II_III Location: 42 5-656 bp Feature: gene Location: 694-2658 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 886-1483 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 886-1483 bp Feature: domain Description: Cas1_I-II-III Location: 1660-2617 bp Feature: domain Description: Cas1_I-II-III Location: 1660-2 617 bp Feature: gene Location: 2734-3072 bp Feature: gene Location: 3537-6539 bp Feature: domain Description: Cas10_III Location: 4200-6135 bp Feature: domain Description: Cas10_III Location: 42 00-6135 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Cas2_I_II_III (cl11442), RVT-CRISPR, Cas1_I-II-III (cl00656), Cas10_III (cl21742)