myRT

myRT report for GCA_003021525.1_ASM302152v1

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Seq: PXPP01000189.1 Cyanobacteria bacterium QH_8_48_120 qh_8_scaffold_387, whole genome shotgun sequence (47856 bp)
Overview 1 RT 1: 33738-39291 bp Neighborhood of RT #1 [33738, 39332] infC InsQ RVT-GII GIIM McrA RVT_N RVT-GII PLN02578 Feature: gene Location: 33738-34268 bp Feature: domain Description: infC Location: 33744-34263 bp Feature: domain Description: infC Location: 33744-34263 bp Feature: gene Location: 34648-35337 bp Feature: domain Description: InsQ Location: 34690-35290 bp Feature: domain Description: InsQ Location: 34690-35290 bp Feature: gene Location: 35489-36409 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 35495-35585 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 35495-35585 bp Feature: domain Description: GIIM Note: maturase Location: 35684-35918 bp Feature: domain Description: GIIM Note: maturase Location: 35684-3591 8 bp Feature: domain Description: McrA Location: 36014-36329 bp Feature: domain Description: McrA Location: 3601 4-36329 bp Feature: gene Location: 36430-37353 bp Feature: domain Description: RVT_N Location: 36490-36736 bp Feature: domain Description: RVT_N Location: 36490-36736 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 36778-37327 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 36778-37327 bp Feature: gene Location: 37739-37897 bp Feature: gene Location: 38382-39332 bp Feature: domain Description: PLN02578 Location: 38445-39291 bp Feature: domain Description: PLN02578 Location: 38445-39291 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT infC (TIGR00168), InsQ (COG0675), RVT-GII, GIIM (pfam08388), McrA (COG4058), RVT_N (pfam13655), PLN02578 (hydrolase)

Seq: PXPP01000166.1 Cyanobacteria bacterium QH_8_48_120 qh_8_scaffold_506, whole genome shotgun sequence (11786 bp)
Overview 1 RT 1: 5807-11604 bp Neighborhood of RT #1 [5807, 11645] Cas10_III Cas10_III RVT-CRISPR RVT-CRISPR Cas1_I-II-III Feature: gene Location: 5807-8809 bp Feature: domain Description: Cas10_III Location: 5981-6407 bp Feature: domain Description: Cas10_III Location: 5981-6407 bp Feature: domain Description: Cas10_III Location: 6470-8405 bp Feature: domain Description: Cas10_III Location: 6470-8405 bp Feature: gene Location: 9274-9612 bp Feature: gene Location: 9688-10293 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 9880-10225 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 9880-102 2 5 bp Feature: gene Location: 10305-11645 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 10311-10470 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 10311-10470 bp Feature: domain Description: Cas1_I-II-III Location: 10647-11604 bp Feature: domain Description: Cas1_I-II-III Location: 10647-11604 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Cas10_III (cl21742), RVT-CRISPR, Cas1_I-II-III (cl00656)