myRT

myRT report for GCA_003021925.1_ASM302192v1

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Seq: PXPQ01000041.1 Cyanobacteria bacterium QH_9_48_43 qh_9_scaffold_1329, whole genome shotgun sequence (5902 bp)
Overview 1 RT 1: 493-5845 bp Neighborhood of RT #1 [493, 5845] Cas2_I_II_III RVT-CRISPR Cas1_I-II-III RVT-CRISPR Feature: gene Location: 493-621 bp Feature: gene Location: 798-1076 bp Feature: domain Description: Cas2_I_II_III Location: 807-1038 bp Feature: domain Description: Cas2_I_II_III Location: 807-1 038 bp Feature: gene Location: 1076-2512 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 1097-1337 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 1 097-1 337 bp Feature: domain Description: Cas1_I-II-III Location: 1514-2471 bp Feature: domain Description: Cas1 _I-II-III Location: 1 51 4-2471 bp Feature: gene Location: 2452-3033 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 2644-2989 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 2644-2989 bp Feature: gene Location: 3109-3447 bp Feature: gene Location: 4154-5845 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Cas2_I_II_III (cl11442), RVT-CRISPR, Cas1_I-II-III (cl00656)

Seq: PXPQ01000065.1 Cyanobacteria bacterium QH_9_48_43 qh_9_scaffold_1462, whole genome shotgun sequence (5610 bp)
Overview 1 RT 1: 2-4616 bp Neighborhood of RT #1 [2, 4756] InsQ RVT_N RVT-GII GIIM McrA Ndh Feature: gene Location: 2-226 bp Feature: domain Description: InsQ Location: 5-155 bp Feature: domain Description: InsQ Location: 5-155 bp Feature: gene Location: 910-2604 bp Feature: domain Description: RVT_N Location: 913-1150 bp Feature: domain Description: RVT_N Location: 913-1150 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1192-1864 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1192 -1864 bp Feature: domain Description: GIIM Note: maturase Location: 1963-2197 bp Feature: domain Description: GIIM Note: maturase Location: 1963-2 197 bp Feature: domain Description: McrA Location: 2317-2590 bp Feature: domain Description: McrA Location: 2 317-2 590 bp Feature: gene Location: 2927-3529 bp Feature: gene Location: 3599-4756 bp Feature: domain Description: Ndh Location: 3605-4616 bp Feature: domain Description: Ndh Location: 3605-4616 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsQ (COG0675), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058), Ndh (COG1252)