myRT

myRT report for GCA_003023745.1_ASM302374v1

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Seq: PXYV01000110.1 Sulfobacillus acidophilus isolate AMDSBA3 AMDSBA3_111, whole genome shotgun sequence (3541 bp)
Overview 1 RT 1: 742-3471 bp Neighborhood of RT #1 [742, 3539] DDE_5 RVT-GII GIIM Feature: gene Location: 742-1662 bp Feature: domain Description: DDE_5 Location: 886-1552 bp Feature: domain Description: DDE_5 Location: 886-1 552 bp Feature: gene Location: 1894-2073 bp Feature: gene Location: 2223-3539 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2532-3168 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2532-31 68 bp Feature: domain Description: GIIM Note: maturase Location: 3243-3471 bp Feature: domain Description: GIIM Note: maturase Location: 3243-3471 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), DDE_5 (pfam13546)

Seq: PXYV01000070.1 Sulfobacillus acidophilus isolate AMDSBA3 AMDSBA3_70, whole genome shotgun sequence (15281 bp)
Overview 1 RT 1: 11899-14822 bp Neighborhood of RT #1 [11899, 15202] InsQ RVT-GII GIIM Feature: gene Location: 11899-12993 bp Feature: domain Description: InsQ Location: 11902-12985 bp Feature: domain Description: InsQ Location: 11902 -12 985 bp Feature: gene Location: 13055-13192 bp Feature: gene Location: 13742-15202 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13952-14540 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13952 -14540 bp Feature: domain Description: GIIM Note: maturase Location: 14669-14822 bp Feature: domain Description: GIIM Note: maturase Location: 14669-1482 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsQ (COG0675), RVT-GII, GIIM (pfam08388)

Seq: PXYV01000071.1 Sulfobacillus acidophilus isolate AMDSBA3 AMDSBA3_71, whole genome shotgun sequence (14966 bp)
Overview 1 RT 1: 85-2896 bp Neighborhood of RT #1 [85, 2896] Phage_int_SAM_1 INT_RitA_C_like RVT-GII Feature: gene Location: 85-1248 bp Feature: domain Description: Phage_int_SAM_1 Location: 460-661 bp Feature: domain Description: Phage_int_SAM_1 Location: 460-661 bp Feature: domain Description: INT_RitA_C_like Location: 748-1240 bp Feature: domain Description: INT_RitA_C_like Location: 748-1240 bp Feature: gene Location: 1423-2100 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1717-2098 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1717-2098 bp Feature: gene Location: 2327-2551 bp Feature: gene Location: 2729-2896 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Phage_int_SAM_1 (pfam02899), INT_RitA_C_like (cd01188)

Seq: PXYV01000090.1 Sulfobacillus acidophilus isolate AMDSBA3 AMDSBA3_90, whole genome shotgun sequence (9287 bp)
Overview 1 RT 1: 2-2733 bp Neighborhood of RT #1 [2, 2733] RVT-GII group_II_RT_mat RVT-GII Feature: gene Location: 2-349 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 104-314 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 104 -314 bp Feature: gene Location: 383-853 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 386-764 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 386-764 bp Feature: gene Location: 881-1027 bp Feature: gene Location: 1440-1715 bp Feature: gene Location: 1727-1990 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1814-1979 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1814 -1979 bp Feature: gene Location: 2002-2190 bp Feature: gene Location: 2506-2733 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, group_II_RT_mat (TIGR04416)