myRT

myRT report for GCA_003024305.1_ASM302430v1

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Seq: PXVZ01000002.1 Escherichia coli strain PairA_ch_1 NODE_17_length_37321_cov_28.9915_ID_33, whole genome shotgun sequence (37321 bp)
Overview 1 RT 1: 16920-20761 bp Neighborhood of RT #1 [16920, 20859] rve_2 RVT-GII GIIM InsG Transposase_20 Feature: gene Location: 16920-17072 bp Feature: domain Description: rve_2 Location: 16950-17058 bp Feature: domain Description: rve_2 Location: 1 6950-1 7058 bp Feature: gene Location: 17345-17650 bp Feature: gene Location: 17693-19081 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18023-18641 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 8023-1 8641 bp Feature: domain Description: GIIM Note: maturase Location: 18689-18920 bp Feature: domain Description: GIIM Note: maturase Location: 1 8689-1 8920 bp Feature: gene Location: 19468-20082 bp Feature: domain Description: InsG Location: 19471-20062 bp Feature: domain Description: InsG Location: 1 9471 -20062 bp Feature: gene Location: 20086-20859 bp Feature: domain Description: Transposase_20 Location: 20515-20761 bp Feature: domain Description: Transposase_20 Location: 2051 5-20761 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rve_2 (pfam13333), RVT-GII, GIIM (pfam08388), InsG (COG3385), Transposase_20 (pfam02371)

Seq: PXVZ01000016.1 Escherichia coli strain PairA_ch_1 NODE_5_length_391359_cov_29.952_ID_9, whole genome shotgun sequence (391359 bp)
Overview 1 RT 1: 380776-389081 bp Neighborhood of RT #1 [380776, 389110] RVT-GII DDE_Tnp_IS66 HTH_23 InsE RVT-GII RVT-GII FHA_bHelix fil_hemag_20aa FHA_bHelix FHA_bHelix Feature: gene Location: 380776-381051 bp Feature: gene Location: 381247-381408 bp Feature: gene Location: 381490-382200 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 381691-382192 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 381691-382 192 bp Feature: gene Location: 382195-382614 bp Feature: gene Location: 382652-383041 bp Feature: domain Description: DDE_Tnp_IS66 Location: 382757-383000 bp Feature: domain Description: DDE_Tnp_IS66 Location: 382 757-383000 bp Feature: gene Location: 384460-385110 bp Feature: domain Description: HTH_23 Location: 384511-384610 bp Feature: domain Description: HTH_2 3 Location: 384511-384610 bp Feature: domain Description: InsE Location: 384736-385087 bp Feature: domain Description: InsE Location: 384736-385087 bp Feature: gene Location: 385482-385685 bp Feature: gene Location: 386092-386466 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 386098-386269 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 386098-3862 69 bp Feature: gene Location: 386482-387294 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 386755-387211 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 386755-3872 11 bp Feature: gene Location: 387415-387618 bp Feature: gene Location: 387905-389110 bp Feature: domain Description: FHA_bHelix Location: 387923-388154 bp Feature: domain Description: FHA_bHelix Location: 38792 3-388154 bp Feature: domain Description: fil_hemag_20aa Location: 388157-388277 bp Feature: domain Description: fil_hemag_2 0aa Location: 388157-3882 77 bp Feature: domain Description: FHA_bHelix Location: 388388-388754 bp Feature: domain Description: FHA_bHelix Location: 388388-388754 bp Feature: domain Description: FHA_bHelix Location: 388973-389081 bp Feature: domain Description: FHA_bHelix Location: 388973-389081 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, DDE_Tnp_IS66 (pfam03050), HTH_23 (pfam13384), InsE (COG2963), FHA_bHelix (sd00046), fil_hemag_20aa (TIGR01731)